RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1008624" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1008624 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2704715 2704715 PRJNA1008624_P_NODE_34483_length_164_cov_0.878261_g34295_i0 PRJNA1008624 34483 164 0.878261 1.44034804 brine shrimp partiti-like virus 2 2900389 Viruses Viruses 294 2.06e-75   NTclustered gi|2209094841|gb|OL472492.1| 2900389 g34295 i0 99.383 10.8231707317073 162 1 99 0 1 162 1306 1145 MAG: Brine shrimp partiti-like virus 2 isolate SD/10-12 segment 4 hypothetical protein gene, complete cds blastn 1775 294 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 2
6532158 6532158 PRJNA1008624_P_NODE_14926_length_218_cov_1.887574_g14738_i0 PRJNA1008624 14926 218 1.887574 4.11491132 brine shrimp partiti-like virus 4 2900391 Viruses Viruses 398 2.1499999999999996e-106   NTclustered gi|2209094901|gb|OL472522.1| 2900391 g14738 i0 100 12.7752293577982 215 0 99 0 4 218 9 223 MAG: Brine shrimp partiti-like virus 4 isolate SD/17-18 RNA-dependent RNA polymerase gene, complete cds blastn 2785 398 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 4
8654469 8654469 PRJNA1008624_P_NODE_18367_length_199_cov_1.373333_g18179_i0 PRJNA1008624 18367 199 1.373333 2.73293267 Viruses 10239 Viruses Viruses 342 9.149999999999999e-90   NTclustered gi|2209094843|gb|OL472493.1| 2900389 g18179 i0 98.454 9.74874371859296 194 3 97 0 4 197 1280 1473 MAG: Brine shrimp partiti-like virus 2 isolate TJ/92-18 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1940 342 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 2
11204630 11204630 PRJNA1008624_P_NODE_18449_length_199_cov_1.013333_g18261_i0 PRJNA1008624 18449 199 1.013333 2.01653267 Viruses 10239 Viruses Viruses 363 7.019999999999998e-96   NTclustered gi|2209094841|gb|OL472492.1| 2900389 g18261 i0 100 10.7738693467337 196 0 98 0 1 196 948 753 MAG: Brine shrimp partiti-like virus 2 isolate SD/10-12 segment 4 hypothetical protein gene, complete cds blastn 2144 363 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 2
11632985 11632985 PRJNA1008624_P_NODE_28970_length_168_cov_0.873950_g28782_i0 PRJNA1008624 28970 168 0.87395 1.468236 brine shrimp partiti-like virus 4 2900391 Viruses Viruses 294 2.12e-75   NTclustered gi|2209094901|gb|OL472522.1| 2900391 g28782 i0 98.788 12.7678571428571 165 2 98 0 4 168 505 669 MAG: Brine shrimp partiti-like virus 4 isolate SD/17-18 RNA-dependent RNA polymerase gene, complete cds blastn 2145 294 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;