RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

41 rows where analysis = "blastn", bioproject = "PRJNA1008624" and tax_phylum = "Chordata"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chordata · 41 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1008624 · 41 ✖

analysis 1

  • blastn · 41 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
153854 153854 PRJNA1008624_P_NODE_10601_length_256_cov_1.884058_g10413_i0 PRJNA1008624 10601 256 1.884058 4.82318848 Spinus spinus 160760 Chordata Chordata 54.7 0.006   NTclustered gi|2917663466|emb|OZ228753.1| 160760 g10413 i0 94.444 0.28125 36 1 14 1 54 88 37205157 37205122 Spinus spinus genome assembly, chromosome: 5 blastn 72 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Fringillidae Spinus Spinus spinus
154647 154647 PRJNA1008624_P_NODE_5881_length_346_cov_2.932660_g5693_i0 PRJNA1008624 5881 346 2.93266 10.1470036 Polypterus senegalus 55291 Chordata Chordata 311 4.89e-80   NTclustered gi|1993937637|ref|XM_039741126.1| 55291 g5693 i0 85.809 13.4335260115607 303 32 87 6 4 305 1425 1133 PREDICTED: Polypterus senegalus E3 SUMO-protein ligase ZBED1-like (LOC120518358), transcript variant X2, mRNA blastn 4648 311 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
1001334 1001334 PRJNA1008624_P_NODE_26601_length_170_cov_1.289256_g26413_i0 PRJNA1008624 26601 170 1.289256 2.1917352 Mus 10088 Chordata Chordata 315 1.64e-81   NTclustered gi|846387676|dbj|LC061971.1| 10090 g26413 i0 100 100 170 0 100 0 1 170 1372 1541 Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_20 blastn 17000 315 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
1429126 1429126 PRJNA1008624_P_NODE_27502_length_169_cov_0.866667_g27314_i0 PRJNA1008624 27502 169 0.866667 1.46466723 Mus musculus 10090 Chordata Chordata 313 5.859999999999999e-81   NTclustered gi|354793913|gb|JN958414.1| 10090 g27314 i0 100 31.4615384615385 169 0 100 0 1 169 3342 3510 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Mrpl27:tm1e(EUCOMM)Wtsi; transgenic blastn 5317 313 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
3551943 3551943 PRJNA1008624_P_NODE_9723_length_268_cov_1.424658_g9535_i0 PRJNA1008624 9723 268 1.424658 3.81808344 Mus 10088 Chordata Chordata 496 9.429999999999999e-136   NTclustered gi|846387786|dbj|LC061991.1| 10090 g9535 i0 100 100 268 0 100 0 1 268 1098 831 Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 blastn 26800 496 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
3981191 3981191 PRJNA1008624_P_NODE_9244_length_275_cov_2.035398_g9056_i0 PRJNA1008624 9244 275 2.035398 5.5973445 Ailuropoda melanoleuca 9646 Chordata Chordata 409 1.3e-109   NTclustered gi|3411197|gb|AF076487.1|AF076487 9646 g9056 i0 93.773 2.87636363636364 273 15 99 2 1 271 30 302 Ailuropoda melanoleuca clone GPMC-122 microsatellite sequence blastn 791 409 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Ursidae Ailuropoda Ailuropoda melanoleuca
4829317 4829317 PRJNA1008624_P_NODE_17744_length_202_cov_1.699346_g17556_i0 PRJNA1008624 17744 202 1.699346 3.43267892 Mus 10088 Chordata Chordata 374 3.3e-99   NTclustered gi|846387786|dbj|LC061991.1| 10090 g17556 i0 100 100 202 0 100 0 1 202 2410 2611 Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 blastn 20200 374 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
5257382 5257382 PRJNA1008624_P_NODE_33745_length_164_cov_0.904348_g33557_i0 PRJNA1008624 33745 164 0.904348 1.48313072 Mus musculus 10090 Chordata Chordata 302 1.23e-77   NTclustered gi|354798787|gb|JN963288.1| 10090 g33557 i0 100 18.109756097561 163 0 99 0 1 163 37733 37895 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Rab23:tm1a(EUCOMM)Wtsi; transgenic blastn 2970 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
6104468 6104468 PRJNA1008624_P_NODE_13645_length_227_cov_1.747191_g13457_i0 PRJNA1008624 13645 227 1.747191 3.96612357 Mus 10088 Chordata Chordata 414 2.2399999999999998e-111   NTclustered gi|756142290|gb|KP260515.1| 10090 g13457 i0 99.559 100 227 1 100 0 1 227 3415 3641 Mus musculus strain ME mitochondrion, complete genome blastn 22700 414 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
6532062 6532062 PRJNA1008624_P_NODE_12266_length_239_cov_0.810526_g12078_i0 PRJNA1008624 12266 239 0.810526 1.93715714 Scyliorhinus canicula 7830 Chordata Chordata 86.1 2.12e-12   NTclustered gi|1952499532|ref|XM_038818577.1| 7830 g12078 i0 83.333 0.401673640167364 96 13 40 2 3 98 1204 1296 PREDICTED: Scyliorhinus canicula cilia and flagella associated protein 300 (cfap300), transcript variant X2, mRNA blastn 96 86.1 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Carcharhiniformes Scyliorhinidae Scyliorhinus Scyliorhinus canicula
7807053 7807053 PRJNA1008624_P_NODE_33627_length_164_cov_0.904348_g33439_i0 PRJNA1008624 33627 164 0.904348 1.48313072 Myxine glutinosa 7769 Chordata Chordata 183 4.65e-42   NTclustered gi|2797601063|ref|XM_068110622.1| 7769 g33439 i0 87.421 8.25609756097561 159 20 97 0 4 162 1221 1379 PREDICTED: Myxine glutinosa uncharacterized protein (LOC137423442), mRNA blastn 1354 183 1 Eukaryota Opisthokonta Metazoa Chordata Myxini Myxiniformes Myxinidae Myxine Myxine glutinosa
8654501 8654501 PRJNA1008624_P_NODE_36707_length_162_cov_0.920354_g36519_i0 PRJNA1008624 36707 162 0.920354 1.49097348 Delphinidae 9726 Chordata Chordata 52.8 0.013   NTclustered gi|2587475102|ref|XM_059996254.1| 9728 g36519 i0 100 9.33333333333333 28 0 17 0 67 94 2937 2910 PREDICTED: Delphinus delphis DAZ interacting zinc finger protein 1 (DZIP1), transcript variant X1, mRNA blastn 1512 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Delphinus Delphinus delphis
10357156 10357156 PRJNA1008624_P_NODE_16309_length_210_cov_1.279503_g16121_i0 PRJNA1008624 16309 210 1.279503 2.6869563 Mus musculus 10090 Chordata Chordata 52.8 0.018   NTclustered gi|83682087|emb|CT025549.13| 10090 g16121 i0 100 0.133333333333333 28 0 13 0 174 201 30576 30549 Mouse DNA sequence from clone RP24-235K10 on chromosome 13, complete sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
10357600 10357600 PRJNA1008624_P_NODE_34089_length_164_cov_0.904348_g33901_i0 PRJNA1008624 34089 164 0.904348 1.48313072 Pteropus vampyrus 132908 Chordata Chordata 52.8 0.014   NTclustered gi|158186895|gb|AC206087.3| 132908 g33901 i0 100 0.170731707317073 28 0 17 0 62 89 23773 23746 Pteropus vampyrus clone CH279-215A8, complete sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Pteropus Pteropus vampyrus
10357628 10357628 PRJNA1008624_P_NODE_35609_length_163_cov_0.912281_g35421_i0 PRJNA1008624 35609 163 0.912281 1.48701803 Mus musculus 10090 Chordata Chordata 302 1.22e-77   NTclustered gi|1669945759|ref|NM_178110.3| 10090 g35421 i0 100 22.4171779141104 163 0 100 0 1 163 2984 2822 Mus musculus tripartite motif-containing 62 (Trim62), transcript variant 2, mRNA blastn 3654 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
11204646 11204646 PRJNA1008624_P_NODE_32849_length_165_cov_0.896552_g32661_i0 PRJNA1008624 32849 165 0.896552 1.4793108 Squamata 8509 Chordata Chordata 52.8 0.014   NTclustered gi|2672823277|ref|XM_003220326.3| 28377 g32661 i0 100 0.509090909090909 28 0 17 0 63 90 1364 1391 PREDICTED: Anolis carolinensis bystin like (bysl), mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Dactyloidae Anolis Anolis carolinensis
11633011 11633011 PRJNA1008624_P_NODE_30230_length_167_cov_0.881356_g30042_i0 PRJNA1008624 30230 167 0.881356 1.47186452 Mus musculus 10090 Chordata Chordata 309 7.53e-80   NTclustered gi|76683220|gb|AC161238.7| 10090 g30042 i0 100 1 167 0 100 0 1 167 90476 90310 Mus musculus chromosome 19, clone RP24-288C19, complete sequence blastn 167 309 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
11633102 11633102 PRJNA1008624_P_NODE_35010_length_163_cov_0.912281_g34822_i0 PRJNA1008624 35010 163 0.912281 1.48701803 Hypanus sabinus 79690 Chordata Chordata 52.8 0.014   NTclustered gi|2587208770|ref|XR_009511202.1| 79690 g34822 i0 100 0.171779141104294 28 0 17 0 136 163 1373 1400 PREDICTED: Hypanus sabinus uncharacterized LOC132391418 (LOC132391418), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Myliobatiformes Dasyatidae Hypanus Hypanus sabinus
12480145 12480145 PRJNA1008624_P_NODE_17410_length_204_cov_1.341935_g17222_i0 PRJNA1008624 17410 204 1.341935 2.7375474 Mus 10088 Chordata Chordata 377 2.59e-100   NTclustered gi|756142290|gb|KP260515.1| 10090 g17222 i0 100 100 204 0 100 0 1 204 2877 3080 Mus musculus strain ME mitochondrion, complete genome blastn 20400 377 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
12480170 12480170 PRJNA1008624_P_NODE_31650_length_166_cov_0.888889_g31462_i0 PRJNA1008624 31650 166 0.888889 1.47555574 Mus 10088 Chordata Chordata 307 2.69e-79   NTclustered gi|756142290|gb|KP260515.1| 10090 g31462 i0 100 100.385542168675 166 0 100 0 1 166 1106 1271 Mus musculus strain ME mitochondrion, complete genome blastn 16664 307 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
12907821 12907821 PRJNA1008624_P_NODE_19231_length_195_cov_1.047945_g19043_i0 PRJNA1008624 19231 195 1.047945 2.04349275 Fringilla coelebs 37598 Chordata Chordata 56.5 0.001   NTclustered gi|2917686708|emb|OZ228791.1| 37598 g19043 i0 100 0.58974358974359 30 0 15 0 42 71 18073848 18073819 Fringilla coelebs genome assembly, chromosome: 12 blastn 115 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Fringillidae Fringilla Fringilla coelebs
13754706 13754706 PRJNA1008624_P_NODE_14231_length_223_cov_1.281609_g14043_i0 PRJNA1008624 14231 223 1.281609 2.85798807 Mus 10088 Chordata Chordata 412 7.88e-111   NTclustered gi|846387786|dbj|LC061991.1| 10090 g14043 i0 100 100 223 0 100 0 1 223 1093 1315 Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 blastn 22300 412 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
13754743 13754743 PRJNA1008624_P_NODE_29711_length_167_cov_0.881356_g29523_i0 PRJNA1008624 29711 167 0.881356 1.47186452 root 1 Root_unresolved Root_unresolved 309 7.53e-80   NTclustered gi|76559763|dbj|AB214501.1| 10090 g29523 i0 100 99.8323353293413 167 0 100 0 1 167 506 340 Mus musculus Ptch1 mRNA for Ptch1 protein +12b, partial cds blastn 16672 309 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
14182995 14182995 PRJNA1008624_P_NODE_26652_length_170_cov_1.256198_g26464_i0 PRJNA1008624 26652 170 1.256198 2.1355366 Pyrrhula murina 928672 Chordata Chordata 54.7 0.004   NTclustered gi|2920008265|emb|OZ238998.1| 928672 g26464 i0 100 0.170588235294118 29 0 17 0 140 168 185133 185105 Pyrrhula murina genome assembly, chromosome: 4 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Fringillidae Pyrrhula Pyrrhula murina
14183073 14183073 PRJNA1008624_P_NODE_30872_length_166_cov_0.888889_g30684_i0 PRJNA1008624 30872 166 0.888889 1.47555574 Narcine bancroftii 1343680 Chordata Chordata 54.7 0.004   NTclustered gi|2853545480|ref|XM_069887338.1| 1343680 g30684 i0 100 0.174698795180723 29 0 17 0 70 98 1708 1736 PREDICTED: Narcine bancroftii ubiquitin-conjugating enzyme E2, J1 (ube2j1), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Torpediniformes Narcinidae Narcine Narcine bancroftii
14183152 14183152 PRJNA1008624_P_NODE_35472_length_163_cov_0.912281_g35284_i0 PRJNA1008624 35472 163 0.912281 1.48701803 Canis lupus 9612 Chordata Chordata 52.8 0.014   NTclustered gi|1953407151|ref|XM_038673577.1| 9615 g35284 i0 100 1.03067484662577 28 0 17 0 119 146 7178 7205 PREDICTED: Canis lupus familiaris nuclear export mediator factor (NEMF), transcript variant X2, mRNA blastn 168 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
16731351 16731351 PRJNA1008624_P_NODE_32654_length_165_cov_0.896552_g32466_i0 PRJNA1008624 32654 165 0.896552 1.4793108 Antechinus flavipes 38775 Chordata Chordata 54.7 0.004   NTclustered gi|2328068684|ref|XM_051992025.1| 38775 g32466 i0 100 0.175757575757576 29 0 18 0 81 109 2022 1994 PREDICTED: Antechinus flavipes nuclear protein 2, transcriptional regulator (NUPR2), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Dasyuromorphia Dasyuridae Antechinus Antechinus flavipes
18006253 18006253 PRJNA1008624_P_NODE_35335_length_163_cov_0.912281_g35147_i0 PRJNA1008624 35335 163 0.912281 1.48701803 Mustela putorius 9668 Chordata Chordata 52.8 0.014   NTclustered gi|2130872651|ref|XM_045081115.1| 9669 g35147 i0 96.875 0.196319018404908 32 0 19 1 6 36 3022 3053 PREDICTED: Mustela putorius furo SLIT-ROBO Rho GTPase activating protein 2 (SRGAP2), transcript variant X10, mRNA blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Mustela Mustela putorius
18853022 18853022 PRJNA1008624_P_NODE_22055_length_185_cov_1.139706_g21867_i0 PRJNA1008624 22055 185 1.139706 2.1084561 Mus 10088 Chordata Chordata 342 8.369999999999999e-90   NTclustered gi|2474805502|gb|MZ353164.1| 10090 g21867 i0 100 100 185 0 100 0 1 185 528 344 Mus musculus isolate NS112M cytochrome oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 18500 342 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
18853058 18853058 PRJNA1008624_P_NODE_6155_length_339_cov_1.793103_g5967_i0 PRJNA1008624 6155 339 1.793103 6.07861917 Mus 10088 Chordata Chordata 625 1.4999999999999999e-174   NTclustered gi|846387586|dbj|LC061956.1| 10090 g5967 i0 100 99.7050147492625 338 0 99 0 1 338 1824 2161 Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_5 blastn 33800 625 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
19279953 19279953 PRJNA1008624_P_NODE_29676_length_167_cov_0.881356_g29488_i0 PRJNA1008624 29676 167 0.881356 1.47186452 Mus musculus 10090 Chordata Chordata 309 7.53e-80   NTclustered gi|26097663|dbj|AK078065.1| 10090 g29488 i0 100 99.940119760479 167 0 100 0 1 167 180 346 Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330416F05 product:splicing factor, arginine/serine-rich 5 (SRp40, HRS), full insert sequence blastn 16690 309 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
19280118 19280118 PRJNA1008624_P_NODE_37676_length_153_cov_2.125000_g37488_i0 PRJNA1008624 37676 153 2.125 3.25125 Mus musculus 10090 Chordata Chordata 278 1.9e-70   NTclustered gi|71060000|emb|CT010336.1| 10090 g37488 i0 100 19.2287581699346 150 0 98 0 4 153 386 535 Mus musculus full open reading frame cDNA clone RZPDo836F1052D for gene Trim21, Tripartite motif protein 21; complete cds, incl. stopcodon blastn 2942 278 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
20127790 20127790 PRJNA1008624_P_NODE_25156_length_174_cov_2.080000_g24968_i0 PRJNA1008624 25156 174 2.08 3.6192 Mus 10088 Chordata Chordata 322 1.01e-83   NTclustered gi|756142290|gb|KP260515.1| 10090 g24968 i0 100 100 174 0 100 0 1 174 3289 3116 Mus musculus strain ME mitochondrion, complete genome blastn 17400 322 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
21403416 21403416 PRJNA1008624_P_NODE_30077_length_167_cov_0.881356_g29889_i0 PRJNA1008624 30077 167 0.881356 1.47186452 Bos 9903 Chordata Chordata 300 4.53e-77   NTclustered gi|2633679555|ref|XR_009735293.1| 9906 g29889 i0 99.394 223.22754491018 165 1 99 0 3 167 1236 1400 PREDICTED: Bos javanicus uncharacterized LOC133244066 (LOC133244066), ncRNA blastn 37279 300 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
21830907 21830907 PRJNA1008624_P_NODE_19218_length_195_cov_1.082192_g19030_i0 PRJNA1008624 19218 195 1.082192 2.1102744 Branchiostoma lanceolatum 7740 Chordata Chordata 52.8 0.017   NTclustered gi|2770773025|ref|XM_066426332.1| 7740 g19030 i0 100 0.287179487179487 28 0 14 0 165 192 1722 1749 PREDICTED: Branchiostoma lanceolatum dehydrogenase/reductase SDR family member 7-like (LOC136433805), transcript variant X1, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma lanceolatum
21831257 21831257 PRJNA1008624_P_NODE_33638_length_164_cov_0.904348_g33450_i0 PRJNA1008624 33638 164 0.904348 1.48313072 Mus musculus 10090 Chordata Chordata 303 3.42e-78   NTclustered gi|1907150982|ref|XM_006501591.5| 10090 g33450 i0 100 53.0670731707317 164 0 100 0 1 164 9269 9432 PREDICTED: Mus musculus mediator complex subunit 12-like (Med12l), transcript variant X13, mRNA blastn 8703 303 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
22678160 22678160 PRJNA1008624_P_NODE_26938_length_169_cov_1.300000_g26750_i0 PRJNA1008624 26938 169 1.3 2.197 Mus 10088 Chordata Chordata 311 2.11e-80   NTclustered gi|846387443|dbj|LC061935.1| 10090 g26750 i0 100 99.4082840236686 168 0 99 0 1 168 1262 1429 Mus musculus mitochondrion DNA, including ND2, tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, tRNA-Tyr, COX1 genes, complete sequence, sequence_id: (4078..6548)_5 blastn 16800 311 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
23106782 23106782 PRJNA1008624_P_NODE_34179_length_164_cov_0.904348_g33991_i0 PRJNA1008624 34179 164 0.904348 1.48313072 Mus musculus 10090 Chordata Chordata 52.8 0.014   NTclustered gi|51241836|gb|AC119911.10| 10090 g33991 i0 100 0.51219512195122 28 0 17 0 97 124 86713 86740 Mus musculus chromosome 1, clone RP24-242P4, complete sequence blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
23106807 23106807 PRJNA1008624_P_NODE_35559_length_163_cov_0.912281_g35371_i0 PRJNA1008624 35559 163 0.912281 1.48701803 Hyla sarda 327740 Chordata Chordata 52.8 0.014   NTclustered gi|2512127063|ref|XM_056521266.1| 327740 g35371 i0 100 1.54601226993865 28 0 17 0 100 127 3079 3052 PREDICTED: Hyla sarda nuclear factor I B (NFIB), transcript variant X3, mRNA blastn 252 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Hylidae Hyla Hyla sarda
24380014 24380014 PRJNA1008624_P_NODE_15160_length_217_cov_1.023810_g14972_i0 PRJNA1008624 15160 217 1.02381 2.2216677 Scyliorhinus canicula 7830 Chordata Chordata 65.8 2.46e-6   NTclustered gi|1952431397|ref|XM_038787618.1| 7830 g14972 i0 90.196 2.04608294930876 51 4 24 1 98 148 2969 3018 PREDICTED: Scyliorhinus canicula zinc finger protein 229-like (LOC119959310), transcript variant X4, mRNA blastn 444 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Carcharhiniformes Scyliorhinidae Scyliorhinus Scyliorhinus canicula
24380096 24380096 PRJNA1008624_P_NODE_17820_length_202_cov_1.274510_g17632_i0 PRJNA1008624 17820 202 1.27451 2.5745102 Mus musculus 10090 Chordata Chordata 366 5.530000000000001e-97   NTclustered gi|71060000|emb|CT010336.1| 10090 g17632 i0 100 46.1138613861386 198 0 98 0 3 200 921 724 Mus musculus full open reading frame cDNA clone RZPDo836F1052D for gene Trim21, Tripartite motif protein 21; complete cds, incl. stopcodon blastn 9315 366 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;