RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1008624" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1008624 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15457001 15457001 PRJNA1008624_P_NODE_29273_length_167_cov_1.737288_g29085_i0 PRJNA1008624 29273 167 1.737288 2.90127096 Cercospora beticola 122368 Fungi Fungi 52.8 0.014   NTclustered gi|2741394181|ref|XM_065602644.1| 122368 g29085 i0 100 0.167664670658683 28 0 17 0 71 98 823 796 Cercospora beticola Acetyl-CoA hydrolase (ACU8), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Cercospora Cercospora beticola
21831152 21831152 PRJNA1008624_P_NODE_27778_length_169_cov_0.866667_g27590_i0 PRJNA1008624 27778 169 0.866667 1.46466723 Alternaria arborescens 156630 Fungi Fungi 296 5.9e-76   NTclustered gi|1607835781|ref|XM_028643862.1| 156630 g27590 i0 98.795 3.92899408284024 166 2 98 0 1 166 1751 1586 Alternaria arborescens Phospholipase (AA0111_g10145), partial mRNA blastn 664 296 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria arborescens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;