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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA1005695" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1005695 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
153658 153658 PRJNA1005695_P_NODE_40681_length_237_cov_4.353659_g39829_i0 PRJNA1005695 40681 237 4.353659 10.31817183 Brachycladium goliath 1751714 Platyhelminthes Platyhelminthes 204 5.549999999999999e-48   NTclustered gi|950639398|gb|KR703279.1| 1751714 g39829 i0 82.553 24.9789029535865 235 38 99 1 3 237 7040 6809 Brachycladium goliath voucher NHMUK:2014.9.12.1 external transcribed spacer 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, and external transcribed spacer, complete sequence blastn 5920 204 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Brachycladiidae Brachycladium Brachycladium goliath
1001193 1001193 PRJNA1005695_P_NODE_9301_length_511_cov_5.315068_g8452_i0 PRJNA1005695 9301 511 5.315068 27.15999748 Testudotaenia 246868 Platyhelminthes Platyhelminthes 939 0   NTclustered gi|42734675|emb|AJ583456.1| 246869 g8452 i0 99.804 100.483365949119 511 1 100 0 1 511 384 894 Testudotaenia cf. testudo partial 28S rRNA gene blastn 51347 939 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Proteocephalidea Proteocephalidae Testudotaenia Testudotaenia cf. testudo
2276208 2276208 PRJNA1005695_P_NODE_22202_length_318_cov_7.873469_g21350_i0 PRJNA1005695 22202 318 7.873469 25.03763142 Plagiorchiida 27871 Platyhelminthes Platyhelminthes 505 1.8999999999999995e-138   NTclustered gi|28273287|gb|AY157175.1| 116879 g21350 i0 95.298 100.399371069182 319 14 100 1 1 318 2380 2062 Lepidophyllum steenstrupi 28S large subunit ribosomal RNA gene, partial sequence blastn 31927 505 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Zoogonidae Lepidophyllum Lepidophyllum steenstrupi
3979921 3979921 PRJNA1005695_P_NODE_26704_length_289_cov_3.537037_g25852_i0 PRJNA1005695 26704 289 3.537037 10.22203693 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 503 6.139999999999998e-138   NTclustered gi|28273263|gb|AY157151.1| 52061 g25852 i0 98.258 41.3148788927336 287 5 99 0 2 288 2121 1835 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 11940 503 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
4829030 4829030 PRJNA1005695_P_NODE_12164_length_442_cov_3.016260_g11312_i0 PRJNA1005695 12164 442 3.01626 13.3318692 Stenostomum 39238 Platyhelminthes Platyhelminthes 785 0   NTclustered gi|209968685|gb|FJ384848.1| 52061 g11312 i0 98.864 56.9705882352941 440 5 99 0 1 440 377 816 Stenostomum leucops isolate K04_75 28S ribosomal RNA gene, partial sequence blastn 25181 785 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
6531809 6531809 PRJNA1005695_P_NODE_40326_length_240_cov_4.383234_g39474_i0 PRJNA1005695 40326 240 4.383234 10.5197616 Artyfechinostomum malayanum 2750923 Platyhelminthes Platyhelminthes 267 7.08e-67   NTclustered gi|2594663801|gb|OR509026.1| 2750923 g39474 i0 87.554 74.5333333333333 233 26 97 2 2 233 8555 8785 Artyfechinostomum malayanum isolate EMI3 external transcribed spacer, partial sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-transcribed intergenic spacer, partial sequence blastn 17888 267 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Echinostomatidae Artyfechinostomum Artyfechinostomum malayanum
11632284 11632284 PRJNA1005695_P_NODE_9530_length_504_cov_4.055684_g8680_i0 PRJNA1005695 9530 504 4.055684 20.44064736 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.049   NTclustered gi|687163270|emb|LN038880.1| 99802 g8680 i0 100 0.0555555555555556 28 0 6 0 103 130 768 741 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0037985 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
12479910 12479910 PRJNA1005695_P_NODE_20910_length_329_cov_4.781250_g20058_i0 PRJNA1005695 20910 329 4.78125 15.7303125 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 606 5.269999999999998e-169   NTclustered gi|2104522515|gb|OK338507.1| 2879638 g20058 i0 100 74.9422492401216 328 0 99 0 2 329 887 560 Renicolidae sp. II_1_Chollas voucher Renicolid_II_1_Chollas large subunit ribosomal RNA gene, partial sequence blastn 24656 606 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Renicolidae   Renicolidae sp. II_1_Chollas
15028917 15028917 PRJNA1005695_P_NODE_33432_length_257_cov_3.945652_g32580_i0 PRJNA1005695 33432 257 3.945652 10.14032564 Plagiorchiida 27871 Platyhelminthes Platyhelminthes 316 7.51e-82   NTclustered gi|1799639269|gb|MN970006.1| 465907 g32580 i0 89.02 35.7665369649805 255 28 99 0 3 257 7090 6836 Fasciola jacksoni isolate Madu small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-transcribed intergenic spacer, partial sequence blastn 9192 316 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola jacksoni
20554633 20554633 PRJNA1005695_P_NODE_20177_length_336_cov_1.741445_g19325_i0 PRJNA1005695 20177 336 1.741445 5.8512552 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.032   NTclustered gi|690573720|emb|LN122496.1| 99802 g19325 i0 94.286 0.104166666666667 35 1 10 1 238 272 480 513 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0114092 blastn 35 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
20554803 20554803 PRJNA1005695_P_NODE_3797_length_819_cov_5.489276_g3142_i0 PRJNA1005695 3797 819 5.489276 44.95717044 Brachycladium goliath 1751714 Platyhelminthes Platyhelminthes 235 7.62e-57   NTclustered gi|1011058740|ref|NC_029757.1| 1751714 g3142 i0 76.872 7.51526251526252 454 81 55 18 1 447 2438 2002 Brachycladium goliath voucher NHMUK:2014.9.12.1 mitochondrion, complete genome blastn 6155 235 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Brachycladiidae Brachycladium Brachycladium goliath
21830299 21830299 PRJNA1005695_P_NODE_2698_length_969_cov_36.142857_g2126_i0 PRJNA1005695 2698 969 36.142857 350.22428433 Brachycladium goliath 1751714 Platyhelminthes Platyhelminthes 363 3.9899999999999996e-95   NTclustered gi|1011058740|ref|NC_029757.1| 1751714 g2126 i0 78.383 54.7884416924665 606 98 61 23 361 953 1989 2574 Brachycladium goliath voucher NHMUK:2014.9.12.1 mitochondrion, complete genome blastn 53090 363 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Brachycladiidae Brachycladium Brachycladium goliath
21830429 21830429 PRJNA1005695_P_NODE_39858_length_242_cov_1.822485_g39006_i0 PRJNA1005695 39858 242 1.822485 4.4104137 Schyzocotyle acheilognathi 135513 Platyhelminthes Platyhelminthes 448 2.3799999999999995e-121   NTclustered gi|1135451336|gb|KX589243.1| 135513 g39006 i0 100 101.045454545455 242 0 100 0 1 242 9279 9038 Schyzocotyle acheilognathi isolate IHB0601 mitochondrion, complete genome blastn 24453 448 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Bothriocephalidea Bothriocephalidae Schyzocotyle Schyzocotyle acheilognathi
23105754 23105754 PRJNA1005695_P_NODE_26679_length_289_cov_30.513889_g25827_i0 PRJNA1005695 26679 289 30.513889 88.18513921 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 276 1.46e-69   NTclustered gi|1084307285|ref|XR_001974651.1| 6183 g25827 i0 84.3 3.88927335640138 293 34 99 10 3 289 290 4 Schistosoma mansoni SRP_RNA blastn 1124 276 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
25227425 25227425 PRJNA1005695_P_NODE_7140_length_587_cov_4.013619_g6308_i0 PRJNA1005695 7140 587 4.013619 23.55994353 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 942 0   NTclustered gi|2104522515|gb|OK338507.1| 2879638 g6308 i0 96.809 103.114139693356 564 18 96 0 1 564 329 892 Renicolidae sp. II_1_Chollas voucher Renicolid_II_1_Chollas large subunit ribosomal RNA gene, partial sequence blastn 60528 948 0.993670886075949 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Renicolidae   Renicolidae sp. II_1_Chollas

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;