RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1005695" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1005695 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1001121 1001121 PRJNA1005695_P_NODE_35521_length_251_cov_0.876404_g34669_i0 PRJNA1005695 35521 251 0.876404 2.19977404 Mucor 4830 Fungi Fungi 460 3.1899999999999997e-125   NTclustered gi|2679299691|gb|PP381569.1| 29924 g34669 i0 100 99.203187250996 249 0 99 0 2 250 611 363 Mucor lusitanicus strain SH06D01 large subunit ribosomal RNA gene, partial sequence blastn 24900 460 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor lusitanicus
3551680 3551680 PRJNA1005695_P_NODE_24583_length_302_cov_127.441048_g23731_i0 PRJNA1005695 24583 302 127.441048 384.87196496 Fungi 4751 Fungi Fungi 124 5.87e-24   NTclustered gi|703265845|emb|HG425939.1| 373545 g23731 i0 82.979 38.6688741721854 141 20 46 4 132 271 441 304 Uncultured Diversispora genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, clone Jasan 21 blastn 11678 124 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Diversisporaceae   uncultured Diversispora
13754602 13754602 PRJNA1005695_P_NODE_42431_length_206_cov_31.706767_g41579_i0 PRJNA1005695 42431 206 31.706767 65.31594002 Fungi 4751 Fungi Fungi 381 2.0199999999999994e-101   NTclustered gi|658131632|emb|HF968958.1| 4874 g41579 i0 100 147.174757281553 206 0 100 0 1 206 1990 2195 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 30318 381 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
23105734 23105734 PRJNA1005695_P_NODE_24339_length_304_cov_2.025974_g23487_i0 PRJNA1005695 24339 304 2.025974 6.15896096 Phycomyces blakesleeanus 4837 Fungi Fungi 206 2.05e-48   NTclustered gi|1069961705|ref|XM_018434095.1| 763407 g23487 i0 79.93 74.5328947368421 284 53 92 4 2 282 458 176 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 22658 206 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;