RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1005695" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1005695 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15456037 15456037 PRJNA1005695_P_NODE_11913_length_448_cov_2.504000_g11061_i0 PRJNA1005695 11913 448 2.504 11.21792 Spizellomyces punctatus 109760 Fungi Fungi 121 1.17e-22   NTclustered gi|1026980695|ref|XM_016752422.1| 645134 g11061 i0 95.946 0.502232142857143 74 3 17 0 365 438 335 408 Spizellomyces punctatus DAOM BR117 uncharacterized protein (SPPG_04176), mRNA blastn 225 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
18005165 18005165 PRJNA1005695_P_NODE_17415_length_362_cov_2.273356_g16563_i0 PRJNA1005695 17415 362 2.273356 8.22954872 Polychytrium aggregatum 110093 Fungi Fungi 195 5.39e-45   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g16563 i0 78.413 5.85082872928177 315 57 85 9 14 321 1175 865 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 2118 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
25227445 25227445 PRJNA1005695_P_NODE_920_length_1602_cov_9.894048_g629_i0 PRJNA1005695 920 1602 9.894048 158.50264896 Entophlyctis 64501 Fungi Fungi 254 4.21e-62   NTclustered gi|1866582500|gb|MT730675.1| 109932 g629 i0 78.81 17.7403245942572 420 58 26 23 1 413 4046 4441 Entophlyctis luteolus isolate JEL0129 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28420 254 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis luteolus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;