contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1004255" and tax_kingdom = "Thermotogati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2276105 | 2276105 | PRJNA1004255_S_NODE_3802_length_288_cov_8.844898_g3594_i0 | PRJNA1004255 | 3802 | 288 | 8.844898 | 25.47330624 | Truepera | 332248 | Bacteria | Bacteria | 274 | 5.22e-69 | NTclustered | gi|2573973991|gb|CP133611.1| | 332249 | g3594 | i0 | 92.632 | 380.239583333333 | 190 | 14 | 66 | 0 | 1 | 190 | 762059 | 762248 | Truepera radiovictrix strain CIP 108686 chromosome, complete genome | blastn | 109509 | 274 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 4828971 | 4828971 | PRJNA1004255_S_NODE_10264_length_199_cov_2.660256_g10056_i0 | PRJNA1004255 | 10264 | 199 | 2.660256 | 5.29390944 | Deinococcus | 1298 | Bacteria | Bacteria | 318 | 1.54e-82 | NTclustered | gi|2304456361|gb|CP104213.1| | 1889240 | g10056 | i0 | 96.373 | 205.497487437186 | 193 | 7 | 97 | 0 | 1 | 193 | 319460 | 319652 | Deinococcus rubellus strain Ant6 chromosome, complete genome | blastn | 40894 | 318 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus rubellus | ||
| 4828986 | 4828986 | PRJNA1004255_S_NODE_18404_length_152_cov_1.724771_g18196_i0 | PRJNA1004255 | 18404 | 152 | 1.724771 | 2.62165192 | Deinococcus | 1298 | Bacteria | Bacteria | 259 | 6.82e-65 | NTclustered | gi|2264081587|gb|CP094462.1| | 1299 | g18196 | i0 | 97.368 | 15 | 152 | 4 | 100 | 0 | 1 | 152 | 2361272 | 2361121 | Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence | blastn | 2280 | 259 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 5256134 | 5256134 | PRJNA1004255_S_NODE_12585_length_181_cov_10.289855_g12377_i0 | PRJNA1004255 | 12585 | 181 | 10.289855 | 18.62463755 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 243 | 8.5e-60 | NTclustered | gi|2621706202|emb|OY764543.1| | 2026798 | g12377 | i0 | 93.293 | 243.458563535912 | 164 | 11 | 91 | 0 | 18 | 181 | 2559565 | 2559402 | MAG: Trueperaceae bacterium isolate 617606ba-ac04-44ed-b980-3de5d93b502e genome assembly, chromosome: 1 | blastn | 44066 | 243 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 11204301 | 11204301 | PRJNA1004255_S_NODE_8729_length_213_cov_2.152941_g8521_i0 | PRJNA1004255 | 8729 | 213 | 2.152941 | 4.58576433 | Deinococcus | 1298 | Bacteria | Bacteria | 388 | 1.26e-103 | NTclustered | gi|2264081587|gb|CP094462.1| | 1299 | g8521 | i0 | 99.531 | 30.2488262910798 | 213 | 1 | 100 | 0 | 1 | 213 | 2585575 | 2585787 | Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence | blastn | 6443 | 388 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 11631819 | 11631819 | PRJNA1004255_S_NODE_3850_length_287_cov_4.967213_g3642_i0 | PRJNA1004255 | 3850 | 287 | 4.967213 | 14.25590131 | Deinococcus radiomollis | 468916 | Bacteria | Bacteria | 486 | 6.139999999999999e-133 | NTclustered | gi|2865409981|gb|CP129906.1| | 468916 | g3642 | i0 | 97.213 | 172.142857142857 | 287 | 8 | 100 | 0 | 1 | 287 | 1002745 | 1002459 | Deinococcus radiomollis strain PO-04-20-132 chromosome, complete genome | blastn | 49405 | 486 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiomollis | ||
| 12479798 | 12479798 | PRJNA1004255_S_NODE_13830_length_174_cov_3.496183_g13622_i0 | PRJNA1004255 | 13830 | 174 | 3.496183 | 6.08335842 | root | 1 | Root_unresolved | Root_unresolved | 265 | 1.73e-66 | NTclustered | gi|2264081587|gb|CP094462.1| | 1299 | g13622 | i0 | 100 | 111.672413793103 | 143 | 0 | 82 | 0 | 1 | 143 | 920055 | 920197 | Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence | blastn | 19431 | 265 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 12479833 | 12479833 | PRJNA1004255_S_NODE_9670_length_204_cov_3.049689_g9462_i0 | PRJNA1004255 | 9670 | 204 | 3.049689 | 6.22136556 | Deinococcus | 1298 | Bacteria | Bacteria | 311 | 2.66e-80 | NTclustered | gi|2264081587|gb|CP094462.1| | 1299 | g9462 | i0 | 94.118 | 15.0049019607843 | 204 | 12 | 100 | 0 | 1 | 204 | 517586 | 517383 | Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence | blastn | 3061 | 311 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 13754410 | 13754410 | PRJNA1004255_S_NODE_7911_length_222_cov_2.100559_g7703_i0 | PRJNA1004255 | 7911 | 222 | 2.100559 | 4.66324098 | Pyramidobacter | 638847 | Bacteria | Bacteria | 259 | 1.08e-64 | NTclustered | gi|167996909|gb|EU379932.1| | 352165 | g7703 | i0 | 87.838 | 58.0225225225225 | 222 | 25 | 100 | 2 | 1 | 222 | 2638 | 2419 | Synergistes sp. W5455 16S ribosomal RNA gene, 16S-23S ribosomal RNA intergenic spacer, 23S ribosomal RNA gene, 23S-5S ribosomal RNA intergenic spacer, and 5S ribosomal RNA gene, complete sequence | blastn | 12881 | 259 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Dethiosulfovibrionaceae | Pyramidobacter | Pyramidobacter piscolens | ||
| 16303499 | 16303499 | PRJNA1004255_S_NODE_6153_length_244_cov_3.432836_g5945_i0 | PRJNA1004255 | 6153 | 244 | 3.432836 | 8.37611984 | Truepera | 332248 | Bacteria | Bacteria | 270 | 5.58e-68 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g5945 | i0 | 86.777 | 49.0409836065574 | 242 | 32 | 99 | 0 | 1 | 242 | 451 | 210 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 11966 | 270 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;