contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA1002816" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7805410 | 7805410 | PRJNA1002816_P_NODE_17127_length_255_cov_1.269231_g16967_i0 | PRJNA1002816 | 17127 | 255 | 1.269231 | 3.23653905 | Hyaloperonospora parasitica | 123356 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.023 | NTclustered | gi|187468407|emb|CU855855.1| | 123356 | g16967 | i0 | 100 | 0.109803921568627 | 28 | 0 | 11 | 0 | 176 | 203 | 107949 | 107976 | H.parasitica DNA sequence from clone HpEmoy2-17E12, complete sequence | blastn | 28 | 52.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Hyaloperonospora | Hyaloperonospora parasitica | ||
| 16729668 | 16729668 | PRJNA1002816_P_NODE_10954_length_336_cov_1.266160_g10794_i0 | PRJNA1002816 | 10954 | 336 | 1.26616 | 4.2542976 | Phytophthora palmivora | 4796 | SAR_Eukaryotes | SAR_Eukaryotes | 243 | 1.75e-59 | NTclustered | gi|2026389858|gb|MT032128.1| | 4796 | g10794 | i0 | 80.122 | 70.2440476190476 | 327 | 63 | 97 | 2 | 1 | 326 | 13682 | 14007 | Phytophthora palmivora mitochondrion, complete genome | blastn | 23602 | 243 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora palmivora | ||
| 16729748 | 16729748 | PRJNA1002816_P_NODE_14894_length_282_cov_1.162679_g14734_i0 | PRJNA1002816 | 14894 | 282 | 1.162679 | 3.27875478 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 254 | 6.64e-63 | NTclustered | gi|698815387|ref|XM_009842421.1| | 112090 | g14734 | i0 | 87.054 | 71.3794326241135 | 224 | 29 | 79 | 0 | 59 | 282 | 64 | 287 | Aphanomyces astaci actin mRNA | blastn | 20129 | 254 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 18004666 | 18004666 | PRJNA1002816_P_NODE_20735_length_241_cov_1.035714_g20575_i0 | PRJNA1002816 | 20735 | 241 | 1.035714 | 2.49607074 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 93.5 | 1.28e-14 | NTclustered | gi|813156946|ref|XM_012346432.1| | 695850 | g20575 | i0 | 93.548 | 35.850622406639 | 62 | 4 | 26 | 0 | 15 | 76 | 136 | 75 | Saprolegnia parasitica CBS 223.65 histone H2B partial mRNA | blastn | 8640 | 93.5 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 25227076 | 25227076 | PRJNA1002816_P_NODE_15120_length_279_cov_1.490291_g14960_i0 | PRJNA1002816 | 15120 | 279 | 1.490291 | 4.15791189 | Saprolegnia | 4769 | SAR_Eukaryotes | SAR_Eukaryotes | 159 | 1.47e-34 | NTclustered | gi|813156379|ref|XM_012346149.1| | 695850 | g14960 | i0 | 83.237 | 3.56989247311828 | 173 | 29 | 62 | 0 | 107 | 279 | 439 | 267 | Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA | blastn | 996 | 159 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;