RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1002816" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1002816 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10356014 10356014 PRJNA1002816_P_NODE_15909_length_270_cov_1.172589_g15749_i0 PRJNA1002816 15909 270 1.172589 3.1659903 Phycomyces blakesleeanus 4837 Fungi Fungi 97.1 1.13e-15   NTclustered gi|1069963725|ref|XM_018438763.1| 763407 g15749 i0 96.552 4.76666666666667 58 2 21 0 1 58 1275 1332 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 1287 97.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
15455396 15455396 PRJNA1002816_P_NODE_10573_length_343_cov_1.066667_g10413_i0 PRJNA1002816 10573 343 1.066667 3.65866781 Halteromyces radiatus 101107 Fungi Fungi 91.6 6.87e-14   NTclustered gi|2323723214|ref|XM_051544668.1| 101107 g10413 i0 98.077 9.54518950437318 52 1 15 0 3 54 465 516 Halteromyces radiatus 40S ribosomal protein S18 (BX664DRAFT_328813), mRNA blastn 3274 91.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
16729719 16729719 PRJNA1002816_P_NODE_13314_length_302_cov_1.344978_g13154_i0 PRJNA1002816 13314 302 1.344978 4.06183356 Mycotypha africana 64632 Fungi Fungi 167 9.619999999999998e-37   NTclustered gi|2432569705|ref|XM_053081713.1| 64632 g13154 i0 82.234 1.0364238410596 197 31 65 4 1 195 368 174 Mycotypha africana 40S ribosomal protein S13 (BDF20DRAFT_882264), mRNA blastn 313 167 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;