RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1002570" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1002570 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1426837 1426837 PRJNA1002570_P_NODE_15342_length_310_cov_3.514768_g15147_i0 PRJNA1002570 15342 310 3.514768 10.8957808 Candidatus Promineifilum breve 1806508 Bacteria Bacteria 185 2.7399999999999998e-42   NTclustered gi|1041165931|emb|LN890655.2| 1806508 g15147 i0 77.023 4.24193548387097 309 62 98 7 4 308 1221583 1221280 Ardenticatena sp. Cfx-K strain Cfx-K genome assembly, chromosome: I blastn 1315 185 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Candidatus Promineifilales Candidatus Promineifilaceae Candidatus Promineifilum Candidatus Promineifilum breve
3978971 3978971 PRJNA1002570_P_NODE_43584_length_241_cov_4.178571_g43389_i0 PRJNA1002570 43584 241 4.178571 10.07035611 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 246 9.27e-61   NTclustered gi|2874253788|emb|OY969772.1| 1672391 g43389 i0 86.076 14.3070539419087 237 23 96 10 10 241 861105 861336 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 blastn 3448 246 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
10355457 10355457 PRJNA1002570_P_NODE_24709_length_280_cov_1.487923_g24514_i0 PRJNA1002570 24709 280 1.487923 4.1661844 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 267 8.46e-67   NTclustered gi|2874253725|emb|OY969567.1| 1672391 g24514 i0 84.364 52.0285714285714 275 39 97 4 1 272 1192704 1192431 MAG: uncultured Chloroflexia bacterium isolate MFD01561.bin.c.1 genome assembly, chromosome: 1 blastn 14568 267 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
10355552 10355552 PRJNA1002570_P_NODE_30629_length_265_cov_5.276042_g30434_i0 PRJNA1002570 30629 265 5.276042 13.9815113 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 137 6.5e-28   NTclustered gi|2874253860|emb|OY969916.1| 1672391 g30434 i0 91.837 68.7358490566038 98 8 37 0 1 98 8074594 8074691 MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 blastn 18215 137 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
10355833 10355833 PRJNA1002570_P_NODE_5649_length_460_cov_1.989664_g5455_i0 PRJNA1002570 5649 460 1.989664 9.1524544 Anaerolineales bacterium 2073117 Bacteria Bacteria 63.9 2.06e-5   NTclustered gi|2556906889|gb|CP129483.1| 2073117 g5455 i0 97.368 0.0826086956521739 38 0 8 1 299 335 1284278 1284241 MAG: Anaerolineales bacterium isolate cMAG.13 chromosome, complete genome blastn 38 63.9 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
14181279 14181279 PRJNA1002570_P_NODE_45592_length_228_cov_3.451613_g45397_i0 PRJNA1002570 45592 228 3.451613 7.86967764 Roseiflexus sp. RS-1 357808 Bacteria Bacteria 87.9 5.57e-13   NTclustered gi|148566298|gb|CP000686.1| 357808 g45397 i0 86.25 2.51315789473684 80 11 35 0 28 107 4091248 4091169 Roseiflexus sp. RS-1, complete genome blastn 573 87.9 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
23104769 23104769 PRJNA1002570_P_NODE_41059_length_245_cov_0.895349_g40864_i0 PRJNA1002570 41059 245 0.895349 2.19360505 uncultured Dehalococcoidia bacterium 498747 Bacteria Bacteria 54.7 0.006   NTclustered gi|2531949168|emb|OY282456.1| 498747 g40864 i0 100 0.118367346938776 29 0 12 0 184 212 3251686 3251714 MAG: uncultured Dehalococcoidia bacterium genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       uncultured Dehalococcoidia bacterium
23104811 23104811 PRJNA1002570_P_NODE_43759_length_241_cov_1.785714_g43564_i0 PRJNA1002570 43759 241 1.785714 4.30357074 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 58.4 4.66e-4   NTclustered gi|2621702680|emb|OY759581.1| 2026734 g43564 i0 97.143 6.19502074688797 35 0 14 1 168 201 2533414 2533448 MAG: Dehalococcoidia bacterium isolate 65a5fbfc-6c1a-4510-92bc-3c45fb3a16c9 genome assembly, chromosome: 1 blastn 1493 58.4 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;