contig_metadata
81 rows where analysis = "blastn", bioproject = "PRJNA1001940" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145747 | 145747 | PRJNA1001940_S_NODE_111521_length_205_cov_2.074074_g110467_i0 | PRJNA1001940 | 111521 | 205 | 2.074074 | 4.2518517 | Pestivirus bovis | 3052619 | Viruses | Viruses | 235 | 1.6599999999999997e-57 | NTclustered | gi|1129880379|gb|KX170557.1| | 11099 | g110467 | i0 | 92.638 | 79.0926829268293 | 163 | 12 | 80 | 0 | 1 | 163 | 15 | 177 | Bovine viral diarrhea virus 1 isolate V045 NS4B gene, partial cds | blastn | 16214 | 235 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 145764 | 145764 | PRJNA1001940_S_NODE_112541_length_204_cov_2.385093_g111487_i0 | PRJNA1001940 | 112541 | 204 | 2.385093 | 4.86558972 | Pestivirus bovis | 3052619 | Viruses | Viruses | 350 | 5.64e-92 | NTclustered | gi|1129880577|gb|KX170656.1| | 11099 | g111487 | i0 | 97.549 | 99.5637254901961 | 204 | 5 | 100 | 0 | 1 | 204 | 691 | 894 | Bovine viral diarrhea virus 1 isolate V015 NS5B gene, partial cds | blastn | 20311 | 350 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 146529 | 146529 | PRJNA1001940_S_NODE_164181_length_169_cov_3.428571_g163127_i0 | PRJNA1001940 | 164181 | 169 | 3.428571 | 5.79428499 | Pestivirus tauri | 3052626 | Viruses | Viruses | 302 | 1.27e-77 | NTclustered | gi|1540352893|gb|MH231138.1| | 54315 | g163127 | i0 | 98.817 | 98.6272189349112 | 169 | 2 | 100 | 0 | 1 | 169 | 2250 | 2418 | Bovine viral diarrhea virus 2 isolate MnFetus polyprotein gene, complete cds | blastn | 16668 | 302 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 147091 | 147091 | PRJNA1001940_S_NODE_203541_length_152_cov_4.366972_g202487_i0 | PRJNA1001940 | 203541 | 152 | 4.366972 | 6.63779744 | Pestivirus bovis | 3052619 | Viruses | Viruses | 261 | 1.9e-65 | NTclustered | gi|806984026|gb|KP756298.1| | 11099 | g202487 | i0 | 98 | 98.9342105263158 | 150 | 3 | 99 | 0 | 3 | 152 | 1080 | 931 | Bovine viral diarrhea virus 1 isolate PI9_MLN_10 nonstructural protein NS5b gene, partial cds | blastn | 15038 | 261 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 147422 | 147422 | PRJNA1001940_S_NODE_31241_length_372_cov_5.893617_g30190_i0 | PRJNA1001940 | 31241 | 372 | 5.893617 | 21.92425524 | Pestivirus bovis | 3052619 | Viruses | Viruses | 588 | 2.1799999999999993e-163 | NTclustered | gi|1129879711|gb|KX170223.1| | 11099 | g30190 | i0 | 95.161 | 99.0564516129032 | 372 | 18 | 100 | 0 | 1 | 372 | 150 | 521 | Bovine viral diarrhea virus 1 isolate V015 Erns gene, partial cds | blastn | 36849 | 588 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1420914 | 1420914 | PRJNA1001940_S_NODE_143362_length_181_cov_2.434783_g142308_i0 | PRJNA1001940 | 143362 | 181 | 2.434783 | 4.40695723 | Caudoviricetes sp. | 2832643 | Viruses | Viruses | 130 | 6.9e-26 | NTclustered | gi|2060049418|tpg|BK027917.1| | 2832643 | g142308 | i0 | 96.25 | 1.28729281767956 | 80 | 2 | 44 | 1 | 25 | 104 | 21273 | 21195 | MAG TPA_asm: Caudoviricetes sp. isolate ctHwC17, partial genome | blastn | 233 | 130 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes sp. | |||||
| 1422340 | 1422340 | PRJNA1001940_S_NODE_46902_length_314_cov_2.409594_g45848_i0 | PRJNA1001940 | 46902 | 314 | 2.409594 | 7.56612516 | Pestivirus bovis | 3052619 | Viruses | Viruses | 486 | 6.7999999999999986e-133 | NTclustered | gi|1350888790|gb|KY852366.1| | 11099 | g45848 | i0 | 94.586 | 99.9044585987261 | 314 | 17 | 100 | 0 | 1 | 314 | 34 | 347 | Bovine viral diarrhea virus 1 isolate S1118 E2 glycoprotein gene, partial cds | blastn | 31370 | 486 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2696113 | 2696113 | PRJNA1001940_S_NODE_128943_length_191_cov_1.621622_g127889_i0 | PRJNA1001940 | 128943 | 191 | 1.621622 | 3.09729802 | Pestivirus bovis | 3052619 | Viruses | Viruses | 324 | 3.1499999999999997e-84 | NTclustered | gi|2553477538|gb|OR004812.1| | 11099 | g127889 | i0 | 97.368 | 99.434554973822 | 190 | 5 | 99 | 0 | 2 | 191 | 5306 | 5495 | Bovine viral diarrhea virus 1 isolate TJ2108, complete genome | blastn | 18992 | 324 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2698172 | 2698172 | PRJNA1001940_S_NODE_76703_length_248_cov_2.429268_g75649_i0 | PRJNA1001940 | 76703 | 248 | 2.429268 | 6.02458464 | Pestivirus bovis | 3052619 | Viruses | Viruses | 387 | 5.409999999999998e-103 | NTclustered | gi|1129879913|gb|KX170324.1| | 11099 | g75649 | i0 | 95.102 | 98.6572580645161 | 245 | 12 | 99 | 0 | 4 | 248 | 181 | 425 | Bovine viral diarrhea virus 1 isolate V083 Npro gene, partial cds | blastn | 24467 | 387 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3550068 | 3550068 | PRJNA1001940_S_NODE_17643_length_456_cov_2.467312_g16610_i0 | PRJNA1001940 | 17643 | 456 | 2.467312 | 11.25094272 | Pestivirus | 11095 | Viruses | Viruses | 771 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g16610 | i0 | 97.351 | 99.0548245614035 | 453 | 12 | 99 | 0 | 1 | 453 | 8006 | 8458 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 45169 | 771 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3550167 | 3550167 | PRJNA1001940_S_NODE_3683_length_740_cov_4.131994_g3079_i0 | PRJNA1001940 | 3683 | 740 | 4.131994 | 30.5767556 | Pestivirus | 11095 | Viruses | Viruses | 1118 | 0 | NTclustered | gi|1129879567|gb|KX170151.1| | 11099 | g3079 | i0 | 93.927 | 100.068918918919 | 741 | 43 | 100 | 2 | 1 | 740 | 1033 | 294 | Bovine viral diarrhea virus 1 isolate V020 E2 gene, partial cds | blastn | 74051 | 1118 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3972842 | 3972842 | PRJNA1001940_S_NODE_164464_length_169_cov_2.111111_g163410_i0 | PRJNA1001940 | 164464 | 169 | 2.111111 | 3.56777759 | Pestivirus bovis | 3052619 | Viruses | Viruses | 274 | 2.7699999999999997e-69 | NTclustered | gi|2419860346|dbj|LC727644.1| | 11099 | g163410 | i0 | 95.858 | 93.414201183432 | 169 | 7 | 100 | 0 | 1 | 169 | 11705 | 11537 | Bovine viral diarrhea virus 1 Tokachi-8 RNA, nearly complete genome | blastn | 15787 | 274 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3973360 | 3973360 | PRJNA1001940_S_NODE_199904_length_153_cov_1.309091_g198850_i0 | PRJNA1001940 | 199904 | 153 | 1.309091 | 2.00290923 | Pestivirus bovis | 3052619 | Viruses | Viruses | 228 | 1.9399999999999995e-55 | NTclustered | gi|1248821481|emb|LT907991.1| | 11099 | g198850 | i0 | 93.464 | 56.4771241830065 | 153 | 10 | 100 | 0 | 1 | 153 | 1713 | 1561 | Bovine viral diarrhea virus 1 isolate VE_138cp_05 genome assembly, complete genome: monopartite | blastn | 8641 | 228 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3974347 | 3974347 | PRJNA1001940_S_NODE_72544_length_255_cov_2.363208_g71490_i0 | PRJNA1001940 | 72544 | 255 | 2.363208 | 6.0261804 | Caudoviricetes sp. | 2832643 | Viruses | Viruses | 398 | 2.5799999999999994e-106 | NTclustered | gi|2054434277|tpg|BK035998.1| | 2832643 | g71490 | i0 | 97.826 | 349.352941176471 | 230 | 5 | 90 | 0 | 26 | 255 | 18424 | 18195 | MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome | blastn | 89085 | 398 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes sp. | |||||
| 5249603 | 5249603 | PRJNA1001940_S_NODE_181685_length_161_cov_1.220339_g180631_i0 | PRJNA1001940 | 181685 | 161 | 1.220339 | 1.96474579 | Nepovirus avii | 3047741 | Viruses | Viruses | 254 | 3.42e-63 | NTclustered | gi|284073172|gb|GU321989.1| | 12615 | g180631 | i0 | 95.031 | 81.0993788819876 | 161 | 8 | 100 | 0 | 1 | 161 | 1004 | 1164 | Cherry leaf roll virus isolate JCM-79 3' UTR | blastn | 13057 | 254 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Secoviridae | Nepovirus | Nepovirus avii | ||
| 5250440 | 5250440 | PRJNA1001940_S_NODE_44585_length_321_cov_3.241007_g43531_i0 | PRJNA1001940 | 44585 | 321 | 3.241007 | 10.40363247 | Pestivirus bovis | 3052619 | Viruses | Viruses | 490 | 5.39e-134 | NTclustered | gi|1732630643|gb|MK509774.1| | 981676 | g43531 | i0 | 94.357 | 99.3613707165109 | 319 | 18 | 99 | 0 | 1 | 319 | 1739 | 1421 | Bovine viral diarrhea virus 1b isolate BVD1b-JH, complete genome | blastn | 31895 | 490 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5250801 | 5250801 | PRJNA1001940_S_NODE_70405_length_259_cov_1.898148_g69351_i0 | PRJNA1001940 | 70405 | 259 | 1.898148 | 4.91620332 | Erythroparvovirus ungulate1 | 3052194 | Viruses | Viruses | 473 | 4.25e-129 | NTclustered | gi|2500352099|ref|NC_074970.1| | 172297 | g69351 | i0 | 99.614 | 9.38996138996139 | 259 | 1 | 100 | 0 | 1 | 259 | 3057 | 2799 | Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds | blastn | 2432 | 473 | 1 | Viruses | Shotokuvirae | Cossaviricota | Quintoviricetes | Piccovirales | Parvoviridae | Erythroparvovirus | Erythroparvovirus ungulate1 | ||
| 6523862 | 6523862 | PRJNA1001940_S_NODE_101406_length_215_cov_2.511628_g100352_i0 | PRJNA1001940 | 101406 | 215 | 2.511628 | 5.4000002 | Erythroparvovirus ungulate1 | 3052194 | Viruses | Viruses | 398 | 2.1099999999999997e-106 | NTclustered | gi|2277478564|gb|MZ502233.1| | 172297 | g100352 | i0 | 100 | 7.69302325581395 | 215 | 0 | 100 | 0 | 1 | 215 | 3965 | 3751 | Bovine parvovirus 3 isolate BCS1/USA nonstructural protein and structural protein genes, complete cds | blastn | 1654 | 398 | 1 | Viruses | Shotokuvirae | Cossaviricota | Quintoviricetes | Piccovirales | Parvoviridae | Erythroparvovirus | Erythroparvovirus ungulate1 | ||
| 6526046 | 6526046 | PRJNA1001940_S_NODE_58706_length_283_cov_2.400000_g57652_i0 | PRJNA1001940 | 58706 | 283 | 2.4 | 6.792 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 523 | 4.5999999999999983e-144 | NTclustered | gi|1920148641|gb|MW184352.1| | 2697049 | g57652 | i0 | 100 | 100 | 283 | 0 | 100 | 0 | 1 | 283 | 28249 | 28531 | Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/AUS/VIC15830/2020, complete genome | blastn | 28300 | 523 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7377087 | 7377087 | PRJNA1001940_S_NODE_4766_length_681_cov_28.531348_g344_i4 | PRJNA1001940 | 4766 | 681 | 28.531348 | 194.29847988 | Pestivirus | 11095 | Viruses | Viruses | 1136 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g344 | i4 | 97.876 | 89.2672540381791 | 659 | 10 | 96 | 2 | 1 | 656 | 658 | 1 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 60791 | 1136 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7798344 | 7798344 | PRJNA1001940_S_NODE_12167_length_513_cov_6.789362_g11177_i0 | PRJNA1001940 | 12167 | 513 | 6.789362 | 34.82942706 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.014 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g11177 | i0 | 100 | 0.0565302144249513 | 29 | 0 | 6 | 0 | 485 | 513 | 34 | 6 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 7798779 | 7798779 | PRJNA1001940_S_NODE_148167_length_178_cov_4.459259_g147113_i0 | PRJNA1001940 | 148167 | 178 | 4.459259 | 7.93748102 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.004 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g147113 | i0 | 100 | 0.792134831460674 | 29 | 0 | 16 | 0 | 150 | 178 | 41 | 13 | Carnation latent virus isolate KL, complete genome | blastn | 141 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 8652695 | 8652695 | PRJNA1001940_S_NODE_3587_length_746_cov_57.675676_g344_i3 | PRJNA1001940 | 3587 | 746 | 57.675676 | 430.26054296 | Pestivirus | 11095 | Viruses | Viruses | 1223 | 0 | NTclustered | gi|2858850729|gb|PQ613798.1| | 11099 | g344 | i3 | 96.247 | 99.8351206434316 | 746 | 28 | 100 | 0 | 1 | 746 | 1251 | 506 | Bovine viral diarrhea virus 1 isolate USMARC/PI-92-21/Serum polyprotein gene, complete cds | blastn | 74477 | 1223 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9072978 | 9072978 | PRJNA1001940_S_NODE_100688_length_216_cov_1.757225_g99634_i0 | PRJNA1001940 | 100688 | 216 | 1.757225 | 3.795606 | Pestivirus bovis | 3052619 | Viruses | Viruses | 348 | 2.1700000000000002e-91 | NTclustered | gi|323225|gb|M96638.1|BVDP2014A | 11099 | g99634 | i0 | 95.814 | 101.361111111111 | 215 | 9 | 99 | 0 | 1 | 215 | 531 | 317 | Bovine viral diarrhea virus nonstructural protein (p20) gene; structural protein (p14) gene, partial ORF | blastn | 21894 | 348 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9073947 | 9073947 | PRJNA1001940_S_NODE_162248_length_170_cov_3.968504_g161194_i0 | PRJNA1001940 | 162248 | 170 | 3.968504 | 6.7464568 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 315 | 1.64e-81 | NTclustered | gi|2036994896|gb|MZ184293.1| | 2697049 | g161194 | i0 | 100 | 100 | 170 | 0 | 100 | 0 | 1 | 170 | 13073 | 13242 | Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/MI-CDC-ASC210035397/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), truncated ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds | blastn | 17000 | 315 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 9074471 | 9074471 | PRJNA1001940_S_NODE_2008_length_885_cov_19.973872_g344_i1 | PRJNA1001940 | 2008 | 885 | 19.973872 | 176.7687672 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1395 | 0 | NTclustered | gi|800924330|gb|KP941590.1| | 11099 | g344 | i1 | 96.244 | 91.0282485875706 | 852 | 31 | 96 | 1 | 34 | 885 | 3 | 853 | Bovine viral diarrhea virus 1 strain USMARC-55924 polyprotein gene, complete cds | blastn | 80560 | 1395 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9074941 | 9074941 | PRJNA1001940_S_NODE_37128_length_348_cov_1.354098_g36074_i0 | PRJNA1001940 | 37128 | 348 | 1.354098 | 4.71226104 | Pestivirus bovis | 3052619 | Viruses | Viruses | 339 | 2.2599999999999997e-88 | NTclustered | gi|800924312|gb|KP941581.1| | 11099 | g36074 | i0 | 97.015 | 93.0948275862069 | 201 | 6 | 100 | 0 | 1 | 201 | 5408 | 5608 | Bovine viral diarrhea virus 1 strain USMARC-51998 polyprotein gene, complete cds | blastn | 32397 | 339 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9075044 | 9075044 | PRJNA1001940_S_NODE_44328_length_322_cov_2.236559_g43274_i0 | PRJNA1001940 | 44328 | 322 | 2.236559 | 7.20171998 | Pestivirus bovis | 3052619 | Viruses | Viruses | 545 | 1.14e-150 | NTclustered | gi|1129880485|gb|KX170610.1| | 11099 | g43274 | i0 | 97.205 | 100 | 322 | 9 | 100 | 0 | 1 | 322 | 580 | 259 | Bovine viral diarrhea virus 1 isolate V070 NS5A gene, partial cds | blastn | 32200 | 545 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9075571 | 9075571 | PRJNA1001940_S_NODE_8168_length_578_cov_14.745794_g4627_i3 | PRJNA1001940 | 8168 | 578 | 14.745794 | 85.23068932 | Pestivirus bovis | 3052619 | Viruses | Viruses | 968 | 0 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g4627 | i3 | 96.886 | 99.9948096885813 | 578 | 18 | 100 | 0 | 1 | 578 | 1623 | 2200 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 57797 | 968 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9927363 | 9927363 | PRJNA1001940_S_NODE_100248_length_216_cov_7.208092_g99194_i0 | PRJNA1001940 | 100248 | 216 | 7.208092 | 15.56947872 | Pestivirus | 11095 | Viruses | Viruses | 339 | 1.3099999999999998e-88 | NTclustered | gi|2858850717|gb|PQ613792.1| | 11099 | g99194 | i0 | 94.907 | 99.8425925925926 | 216 | 11 | 100 | 0 | 1 | 216 | 9693 | 9908 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds | blastn | 21566 | 339 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 10349450 | 10349450 | PRJNA1001940_S_NODE_151849_length_176_cov_2.165414_g150795_i0 | PRJNA1001940 | 151849 | 176 | 2.165414 | 3.81112864 | Caudoviricetes sp. | 2832643 | Viruses | Viruses | 281 | 1.74e-71 | NTclustered | gi|2054434277|tpg|BK035998.1| | 2832643 | g150795 | i0 | 95.48 | 373.954545454545 | 177 | 6 | 100 | 2 | 1 | 176 | 18228 | 18053 | MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome | blastn | 65816 | 281 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes sp. | |||||
| 10350482 | 10350482 | PRJNA1001940_S_NODE_22389_length_420_cov_7.994695_g21347_i0 | PRJNA1001940 | 22389 | 420 | 7.994695 | 33.577719 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.011 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g21347 | i0 | 100 | 0.135714285714286 | 29 | 0 | 7 | 0 | 392 | 420 | 34 | 6 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 57 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 10351127 | 10351127 | PRJNA1001940_S_NODE_69489_length_261_cov_1.321101_g68435_i0 | PRJNA1001940 | 69489 | 261 | 1.321101 | 3.44807361 | Pestivirus tauri | 3052626 | Viruses | Viruses | 466 | 7.17e-127 | NTclustered | gi|737515360|dbj|AB894423.1| | 54315 | g68435 | i0 | 98.851 | 99.992337164751 | 261 | 3 | 100 | 0 | 1 | 261 | 4589 | 4849 | Bovine viral diarrhea virus 2 genomic RNA, complete genome, strain: GBK_E+ | blastn | 26098 | 466 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 10351220 | 10351220 | PRJNA1001940_S_NODE_7549_length_592_cov_16.491803_g4627_i1 | PRJNA1001940 | 7549 | 592 | 16.491803 | 97.63147376 | Pestivirus bovis | 3052619 | Viruses | Viruses | 989 | 0 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g4627 | i1 | 96.791 | 99.9628378378378 | 592 | 19 | 100 | 0 | 1 | 592 | 1441 | 2032 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 59178 | 989 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11202852 | 11202852 | PRJNA1001940_S_NODE_4769_length_681_cov_24.152038_g344_i5 | PRJNA1001940 | 4769 | 681 | 24.152038 | 164.47537878 | Pestivirus | 11095 | Viruses | Viruses | 1120 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g344 | i5 | 97.42 | 89.496328928047 | 659 | 13 | 96 | 2 | 1 | 656 | 658 | 1 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 60947 | 1120 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11624317 | 11624317 | PRJNA1001940_S_NODE_117270_length_200_cov_1.834395_g116216_i0 | PRJNA1001940 | 117270 | 200 | 1.834395 | 3.66879 | Pestivirus bovis | 3052619 | Viruses | Viruses | 248 | 2.06e-61 | NTclustered | gi|1129879631|gb|KX170183.1| | 11099 | g116216 | i0 | 89 | 54.135 | 200 | 22 | 100 | 0 | 1 | 200 | 719 | 520 | Bovine viral diarrhea virus 1 isolate V008 E2 gene, partial cds | blastn | 10827 | 248 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11625423 | 11625423 | PRJNA1001940_S_NODE_18770_length_446_cov_4.870968_g17735_i0 | PRJNA1001940 | 18770 | 446 | 4.870968 | 21.72451728 | Skokie dicistro-like virus | 2789443 | Viruses | Viruses | 791 | 0 | NTclustered | gi|2806502719|gb|PQ054859.1| | 2789443 | g17735 | i0 | 98.655 | 5 | 446 | 6 | 100 | 0 | 1 | 446 | 761 | 1206 | MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence | blastn | 2230 | 791 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Dicistroviridae | Skokie dicistro-like virus | |||
| 11625924 | 11625924 | PRJNA1001940_S_NODE_28770_length_384_cov_3.683284_g27721_i0 | PRJNA1001940 | 28770 | 384 | 3.683284 | 14.14381056 | Pestivirus bovis | 3052619 | Viruses | Viruses | 654 | 0 | NTclustered | gi|800924312|gb|KP941581.1| | 11099 | g27721 | i0 | 97.396 | 99.8697916666667 | 384 | 10 | 100 | 0 | 1 | 384 | 3925 | 4308 | Bovine viral diarrhea virus 1 strain USMARC-51998 polyprotein gene, complete cds | blastn | 38350 | 654 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11626239 | 11626239 | PRJNA1001940_S_NODE_51810_length_300_cov_4.066148_g50756_i0 | PRJNA1001940 | 51810 | 300 | 4.066148 | 12.198444 | Erythroparvovirus ungulate1 | 3052194 | Viruses | Viruses | 544 | 3.78e-150 | NTclustered | gi|2500352099|ref|NC_074970.1| | 172297 | g50756 | i0 | 99.333 | 8.95 | 300 | 2 | 100 | 0 | 1 | 300 | 1932 | 2231 | Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds | blastn | 2685 | 544 | 1 | Viruses | Shotokuvirae | Cossaviricota | Quintoviricetes | Piccovirales | Parvoviridae | Erythroparvovirus | Erythroparvovirus ungulate1 | ||
| 12478410 | 12478410 | PRJNA1001940_S_NODE_22150_length_422_cov_3.137203_g21108_i0 | PRJNA1001940 | 22150 | 422 | 3.137203 | 13.23899666 | Pestivirus | 11095 | Viruses | Viruses | 641 | 1.9e-179 | NTclustered | gi|800924324|gb|KP941587.1| | 11099 | g21108 | i0 | 94.076 | 99.8578199052133 | 422 | 25 | 100 | 0 | 1 | 422 | 8829 | 8408 | Bovine viral diarrhea virus 1 strain USMARC-55478 polyprotein gene, complete cds | blastn | 42140 | 641 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12478448 | 12478448 | PRJNA1001940_S_NODE_450_length_1323_cov_30.116406_g344_i0 | PRJNA1001940 | 450 | 1323 | 30.116406 | 398.44005138 | Pestivirus | 11095 | Viruses | Viruses | 2106 | 0 | NTclustered | gi|575471150|gb|KF772785.1| | 11099 | g344 | i0 | 95.994 | 91.1798941798942 | 1298 | 48 | 98 | 3 | 26 | 1323 | 1 | 1294 | Bovine viral diarrhea virus 1 isolate CC13B, complete genome | blastn | 120631 | 2106 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12899564 | 12899564 | PRJNA1001940_S_NODE_124691_length_194_cov_2.225166_g123637_i0 | PRJNA1001940 | 124691 | 194 | 2.225166 | 4.31682204 | Staphylococcus phage MarsHill | 2796499 | Viruses | Viruses | 270 | 4.2499999999999985e-68 | NTclustered | gi|1953870784|gb|MW248466.1| | 2796499 | g123637 | i0 | 91.753 | 4.77835051546392 | 194 | 16 | 100 | 0 | 1 | 194 | 245153 | 244960 | Staphylococcus phage MarsHill, complete genome | blastn | 927 | 270 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Staphylococcus phage MarsHill | |||||
| 12900876 | 12900876 | PRJNA1001940_S_NODE_214131_length_150_cov_1.794393_g213077_i0 | PRJNA1001940 | 214131 | 150 | 1.794393 | 2.6915895 | Tobamovirus capsici | 3432865 | Viruses | Viruses | 270 | 3.1e-68 | NTclustered | gi|2432630479|gb|OQ160839.1| | 12239 | g213077 | i0 | 99.333 | 90.4266666666667 | 150 | 0 | 100 | 1 | 1 | 150 | 323 | 175 | MAG: Pepper mild mottle virus isolate 41115269 RNA-dependent RNA polymerase, Small replicase subunit, movement protein, and coat protein genes, complete cds | blastn | 13564 | 270 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus capsici | ||
| 12901114 | 12901114 | PRJNA1001940_S_NODE_36611_length_349_cov_40.150327_g35557_i0 | PRJNA1001940 | 36611 | 349 | 40.150327 | 140.12464123 | Betaentomopoxvirus amoorei | 28321 | Viruses | Viruses | 52.8 | 0.033 | NTclustered | gi|9964314|ref|NC_002520.1| | 28321 | g35557 | i0 | 94.286 | 0.100286532951289 | 35 | 1 | 10 | 1 | 105 | 138 | 153475 | 153509 | Amsacta moorei entomopoxvirus 'L', complete genome | blastn | 35 | 52.8 | 1 | Viruses | Bamfordvirae | Nucleocytoviricota | Pokkesviricetes | Chitovirales | Poxviridae | Betaentomopoxvirus | Betaentomopoxvirus amoorei | ||
| 12901216 | 12901216 | PRJNA1001940_S_NODE_45131_length_319_cov_7.851449_g44077_i0 | PRJNA1001940 | 45131 | 319 | 7.851449 | 25.04612231 | Pestivirus bovis | 3052619 | Viruses | Viruses | 534 | 2.44e-147 | NTclustered | gi|1350888790|gb|KY852366.1| | 11099 | g44077 | i0 | 96.865 | 99.7742946708464 | 319 | 10 | 100 | 0 | 1 | 319 | 352 | 34 | Bovine viral diarrhea virus 1 isolate S1118 E2 glycoprotein gene, partial cds | blastn | 31828 | 534 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12901736 | 12901736 | PRJNA1001940_S_NODE_81131_length_241_cov_2.424242_g80077_i0 | PRJNA1001940 | 81131 | 241 | 2.424242 | 5.84242322 | Pestivirus bovis | 3052619 | Viruses | Viruses | 396 | 8.7e-106 | NTclustered | gi|118498778|gb|EF101530.1| | 11099 | g80077 | i0 | 96.266 | 83.6721991701245 | 241 | 9 | 100 | 0 | 1 | 241 | 878 | 638 | Bovine viral diarrhea virus 1 strain KE9, complete genome | blastn | 20165 | 396 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14174362 | 14174362 | PRJNA1001940_S_NODE_116852_length_200_cov_4.961783_g115798_i0 | PRJNA1001940 | 116852 | 200 | 4.961783 | 9.923566 | Pestivirus bovis | 3052619 | Viruses | Viruses | 348 | 1.98e-91 | NTclustered | gi|1036031867|gb|AH012705.2| | 11099 | g115798 | i0 | 98 | 99.055 | 200 | 4 | 100 | 0 | 1 | 200 | 5106 | 4907 | Bovine viral diarrhea virus 1 strain CP8 polyprotein genes, partial cds | blastn | 19811 | 348 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14176171 | 14176171 | PRJNA1001940_S_NODE_45772_length_317_cov_4.806569_g44718_i0 | PRJNA1001940 | 45772 | 317 | 4.806569 | 15.23682373 | Pestivirus bovis | 3052619 | Viruses | Viruses | 514 | 3.15e-141 | NTclustered | gi|1129880481|gb|KX170608.1| | 11099 | g44718 | i0 | 95.899 | 99.9242902208202 | 317 | 13 | 100 | 0 | 1 | 317 | 454 | 138 | Bovine viral diarrhea virus 1 isolate V031 NS5A gene, partial cds | blastn | 31676 | 514 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14176276 | 14176276 | PRJNA1001940_S_NODE_53172_length_297_cov_1.440945_g52118_i0 | PRJNA1001940 | 53172 | 297 | 1.440945 | 4.27960665 | Pestivirus bovis | 3052619 | Viruses | Viruses | 505 | 1.7599999999999995e-138 | NTclustered | gi|2419860346|dbj|LC727644.1| | 11099 | g52118 | i0 | 97.627 | 99.2828282828283 | 295 | 6 | 99 | 1 | 1 | 294 | 7065 | 7359 | Bovine viral diarrhea virus 1 Tokachi-8 RNA, nearly complete genome | blastn | 29487 | 505 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15027493 | 15027493 | PRJNA1001940_S_NODE_97732_length_219_cov_2.829545_g96678_i0 | PRJNA1001940 | 97732 | 219 | 2.829545 | 6.19670355 | Pestivirus | 11095 | Viruses | Viruses | 361 | 2.83e-95 | NTclustered | gi|1129880363|gb|KX170549.1| | 11099 | g96678 | i0 | 96.347 | 99.8812785388128 | 219 | 8 | 100 | 0 | 1 | 219 | 458 | 676 | Bovine viral diarrhea virus 1 isolate V070 NS4B gene, partial cds | blastn | 21874 | 361 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15449361 | 15449361 | PRJNA1001940_S_NODE_172173_length_165_cov_2.754098_g171119_i0 | PRJNA1001940 | 172173 | 165 | 2.754098 | 4.5442617 | Pestivirus bovis | 3052619 | Viruses | Viruses | 283 | 4.4899999999999995e-72 | NTclustered | gi|2419860354|dbj|LC727648.1| | 11099 | g171119 | i0 | 97.576 | 99.7333333333333 | 165 | 4 | 100 | 0 | 1 | 165 | 10899 | 10735 | Bovine viral diarrhea virus 1 Tokachi-27 RNA, nearly complete genome | blastn | 16456 | 283 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15450266 | 15450266 | PRJNA1001940_S_NODE_40353_length_335_cov_12.061644_g39299_i0 | PRJNA1001940 | 40353 | 335 | 12.061644 | 40.4065074 | Pestivirus bovis | 3052619 | Viruses | Viruses | 569 | 7.049999999999998e-158 | NTclustered | gi|1350888790|gb|KY852366.1| | 11099 | g39299 | i0 | 97.313 | 99.8417910447761 | 335 | 9 | 100 | 0 | 1 | 335 | 352 | 18 | Bovine viral diarrhea virus 1 isolate S1118 E2 glycoprotein gene, partial cds | blastn | 33447 | 569 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15450554 | 15450554 | PRJNA1001940_S_NODE_6073_length_634_cov_8.170897_g5274_i0 | PRJNA1001940 | 6073 | 634 | 8.170897 | 51.80348698 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.018 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g5274 | i0 | 100 | 0.0457413249211356 | 29 | 0 | 5 | 0 | 606 | 634 | 34 | 6 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 16302004 | 16302004 | PRJNA1001940_S_NODE_17793_length_454_cov_10.306569_g16759_i0 | PRJNA1001940 | 17793 | 454 | 10.306569 | 46.79182326 | Pestivirus | 11095 | Viruses | Viruses | 778 | 0 | NTclustered | gi|1129880599|gb|KX170667.1| | 11099 | g16759 | i0 | 97.577 | 99.9867841409692 | 454 | 11 | 100 | 0 | 1 | 454 | 1803 | 1350 | Bovine viral diarrhea virus 1 isolate V075 NS5B gene, partial cds | blastn | 45394 | 784 | 0.99234693877551 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16302155 | 16302155 | PRJNA1001940_S_NODE_77193_length_247_cov_5.039216_g76139_i0 | PRJNA1001940 | 77193 | 247 | 5.039216 | 12.44686352 | Pestivirus | 11095 | Viruses | Viruses | 368 | 1.95e-97 | NTclustered | gi|800924324|gb|KP941587.1| | 11099 | g76139 | i0 | 93.522 | 99.5748987854251 | 247 | 16 | 100 | 0 | 1 | 247 | 602 | 848 | Bovine viral diarrhea virus 1 strain USMARC-55478 polyprotein gene, complete cds | blastn | 24595 | 368 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16723044 | 16723044 | PRJNA1001940_S_NODE_141554_length_182_cov_4.323741_g140500_i0 | PRJNA1001940 | 141554 | 182 | 4.323741 | 7.86920862 | Pestivirus bovis | 3052619 | Viruses | Viruses | 303 | 3.87e-78 | NTclustered | gi|2858850717|gb|PQ613792.1| | 11099 | g140500 | i0 | 96.703 | 99.8681318681319 | 182 | 6 | 100 | 0 | 1 | 182 | 2099 | 2280 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds | blastn | 18176 | 303 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16724171 | 16724171 | PRJNA1001940_S_NODE_22034_length_423_cov_1.894737_g20992_i0 | PRJNA1001940 | 22034 | 423 | 1.894737 | 8.01473751 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.011 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g20992 | i0 | 100 | 0.333333333333333 | 29 | 0 | 7 | 0 | 395 | 423 | 41 | 13 | Carnation latent virus isolate KL, complete genome | blastn | 141 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 17577281 | 17577281 | PRJNA1001940_S_NODE_1454_length_971_cov_10.003233_g1158_i0 | PRJNA1001940 | 1454 | 971 | 10.003233 | 97.13139243 | Pestivirus | 11095 | Viruses | Viruses | 1550 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g1158 | i0 | 95.469 | 99.994850669413 | 971 | 44 | 100 | 0 | 1 | 971 | 9613 | 10583 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 97095 | 1550 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 17997341 | 17997341 | PRJNA1001940_S_NODE_109995_length_207_cov_1.170732_g108941_i0 | PRJNA1001940 | 109995 | 207 | 1.170732 | 2.42341524 | Huanghaivirus snothree | 3060040 | Viruses | Viruses | 52.8 | 0.018 | NTclustered | gi|2438097045|ref|NC_070959.1| | 2718943 | g108941 | i0 | 96.875 | 0.154589371980676 | 32 | 0 | 15 | 1 | 77 | 107 | 130208 | 130177 | Synechococcus phage S-N03, complete genome | blastn | 32 | 52.8 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Pantevenvirales | Kyanoviridae | Huanghaivirus | Huanghaivirus snothree | ||
| 17998095 | 17998095 | PRJNA1001940_S_NODE_157015_length_173_cov_2.215385_g155961_i0 | PRJNA1001940 | 157015 | 173 | 2.215385 | 3.83261605 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 320 | 3.61e-83 | NTclustered | gi|2499447400|emb|OX492971.1| | 2697049 | g155961 | i0 | 100 | 100 | 173 | 0 | 100 | 0 | 1 | 173 | 1456 | 1628 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 17300 | 320 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 17999853 | 17999853 | PRJNA1001940_S_NODE_82315_length_239_cov_5.015306_g81261_i0 | PRJNA1001940 | 82315 | 239 | 5.015306 | 11.98658134 | Botrytimonavirus botrytidis | 2843870 | Viruses | Viruses | 52.8 | 0.021 | NTclustered | gi|2500379340|ref|NC_076491.1| | 2731253 | g81261 | i0 | 100 | 0.117154811715481 | 28 | 0 | 12 | 0 | 98 | 125 | 342 | 315 | Botrytis cinerea negative-stranded RNA virus 7 isolate BCS13_DN1 hypothetical protein (QKO64_gp1), RNA-dependent RNA polymerase (QKO64_gp2), hypothetical protein (QKO64_gp3), and hypothetical protein (QKO64_gp4) genes, complete cds | blastn | 28 | 52.8 | 1 | Viruses | Orthornavirae | Negarnaviricota | Monjiviricetes | Mononegavirales | Mymonaviridae | Botrytimonavirus | Botrytimonavirus botrytidis | ||
| 18851157 | 18851157 | PRJNA1001940_S_NODE_15555_length_474_cov_12.823666_g14528_i0 | PRJNA1001940 | 15555 | 474 | 12.823666 | 60.78417684 | Pestivirus | 11095 | Viruses | Viruses | 737 | 0 | NTclustered | gi|386285713|gb|JQ418634.1| | 11099 | g14528 | i0 | 94.904 | 99.915611814346 | 471 | 24 | 99 | 0 | 1 | 471 | 1759 | 2229 | Bovine viral diarrhea virus 1 isolate 08GB45-2 polyprotein gene, complete cds | blastn | 47360 | 737 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19271910 | 19271910 | PRJNA1001940_S_NODE_15356_length_476_cov_7.346420_g14329_i0 | PRJNA1001940 | 15356 | 476 | 7.34642 | 34.9689592 | Pestivirus bovis | 3052619 | Viruses | Viruses | 680 | 0 | NTclustered | gi|2858850691|gb|PQ613779.1| | 11099 | g14329 | i0 | 92.437 | 99.8760504201681 | 476 | 36 | 100 | 0 | 1 | 476 | 2082 | 2557 | Bovine viral diarrhea virus 1 isolate USMARC/PI-86-21/Serum polyprotein gene, complete cds | blastn | 47541 | 680 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19273640 | 19273640 | PRJNA1001940_S_NODE_78096_length_246_cov_1.738916_g77042_i0 | PRJNA1001940 | 78096 | 246 | 1.738916 | 4.27773336 | Pestivirus bovis | 3052619 | Viruses | Viruses | 388 | 1.49e-103 | NTclustered | gi|323212|gb|M87808.1|BVDMSEQD | 11099 | g77042 | i0 | 95.122 | 100.922764227642 | 246 | 12 | 100 | 0 | 1 | 246 | 337 | 92 | Bovine viral diarrhea virus mRNA sequence | blastn | 24827 | 388 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20126021 | 20126021 | PRJNA1001940_S_NODE_200496_length_153_cov_1.309091_g199442_i0 | PRJNA1001940 | 200496 | 153 | 1.309091 | 2.00290923 | Pestivirus | 11095 | Viruses | Viruses | 261 | 1.91e-65 | NTclustered | gi|1628570|gb|U63512.1|BVU63512 | 11099 | g199442 | i0 | 97.386 | 99.1307189542484 | 153 | 4 | 100 | 0 | 1 | 153 | 2005 | 2157 | Bovine viral diarrhea virus cytopathogenic strain CP7, polyprotein gene, E2 region to NS4B, partial cds | blastn | 15167 | 261 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20126081 | 20126081 | PRJNA1001940_S_NODE_4156_length_712_cov_8.805680_g3502_i0 | PRJNA1001940 | 4156 | 712 | 8.80568 | 62.6964416 | root | 1 | Root_unresolved | Root_unresolved | 1122 | 0 | NTclustered | gi|507866705|gb|KC695815.1| | 11099 | g3502 | i0 | 95.205 | 97.2879213483146 | 709 | 34 | 99 | 0 | 1 | 709 | 76 | 784 | Bovine viral diarrhea virus 1 isolate Av69 SD-1 polyprotein gene, partial cds | blastn | 69269 | 1127 | 0.995563442768412 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20126156 | 20126156 | PRJNA1001940_S_NODE_9756_length_549_cov_3.786561_g4874_i1 | PRJNA1001940 | 9756 | 549 | 3.786561 | 20.78821989 | Pestivirus | 11095 | Viruses | Viruses | 870 | 0 | NTclustered | gi|2149466|gb|U86599.1|PTU86599 | 11099 | g4874 | i1 | 95.264 | 99.9908925318761 | 549 | 26 | 100 | 0 | 1 | 549 | 2007 | 1459 | Pestivirus type 1 cytopathic genomic RNA, complete genome | blastn | 54895 | 870 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20547296 | 20547296 | PRJNA1001940_S_NODE_139617_length_184_cov_1.021277_g138563_i0 | PRJNA1001940 | 139617 | 184 | 1.021277 | 1.87914968 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.004 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g138563 | i0 | 100 | 0.766304347826087 | 29 | 0 | 16 | 0 | 156 | 184 | 41 | 13 | Carnation latent virus isolate KL, complete genome | blastn | 141 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 20548888 | 20548888 | PRJNA1001940_S_NODE_5377_length_658_cov_14.556098_g4627_i0 | PRJNA1001940 | 5377 | 658 | 14.556098 | 95.77912484 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1088 | 0 | NTclustered | gi|530291193|gb|KC963967.1| | 11099 | g4627 | i0 | 96.505 | 100 | 658 | 23 | 100 | 0 | 1 | 658 | 4715 | 4058 | Bovine viral diarrhea virus 1 isolate 12F004, complete genome | blastn | 65800 | 1088 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20549323 | 20549323 | PRJNA1001940_S_NODE_84417_length_236_cov_3.854922_g83363_i0 | PRJNA1001940 | 84417 | 236 | 3.854922 | 9.09761592 | Pestivirus bovis | 3052619 | Viruses | Viruses | 394 | 3.05e-105 | NTclustered | gi|2858850717|gb|PQ613792.1| | 11099 | g83363 | i0 | 97.009 | 99.1101694915254 | 234 | 7 | 99 | 0 | 1 | 234 | 1111 | 1344 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds | blastn | 23390 | 394 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21401658 | 21401658 | PRJNA1001940_S_NODE_2917_length_795_cov_21.376330_g344_i2 | PRJNA1001940 | 2917 | 795 | 21.37633 | 169.9418235 | Pestivirus | 11095 | Viruses | Viruses | 1254 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g344 | i2 | 96.224 | 90.1396226415094 | 768 | 25 | 96 | 2 | 6 | 770 | 767 | 1 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 71661 | 1254 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 22676466 | 22676466 | PRJNA1001940_S_NODE_45758_length_317_cov_5.580292_g44704_i0 | PRJNA1001940 | 45758 | 317 | 5.580292 | 17.68952564 | Pestivirus | 11095 | Viruses | Viruses | 503 | 6.82e-138 | NTclustered | gi|2419860348|dbj|LC727645.1| | 11099 | g44704 | i0 | 95.268 | 99.9085173501577 | 317 | 15 | 100 | 0 | 1 | 317 | 7970 | 7654 | Bovine viral diarrhea virus 1 Tokachi-13 RNA, nearly complete genome | blastn | 31671 | 508 | 0.990157480314961 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23097683 | 23097683 | PRJNA1001940_S_NODE_100599_length_216_cov_1.942197_g99545_i0 | PRJNA1001940 | 100599 | 216 | 1.942197 | 4.19514552 | Pestivirus bovis | 3052619 | Viruses | Viruses | 322 | 1.32e-83 | NTclustered | gi|2743179413|gb|PP856400.1| | 11099 | g99545 | i0 | 93.897 | 77.6805555555556 | 213 | 13 | 99 | 0 | 4 | 216 | 8586 | 8374 | Bovine viral diarrhea virus 1 strain PZ29, partial genome | blastn | 16779 | 322 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23099404 | 23099404 | PRJNA1001940_S_NODE_215099_length_150_cov_1.345794_g214045_i0 | PRJNA1001940 | 215099 | 150 | 1.345794 | 2.018691 | Pestivirus bovis | 3052619 | Viruses | Viruses | 244 | 1.88e-60 | NTclustered | gi|2666910701|gb|PP213451.1| | 981676 | g214045 | i0 | 96 | 99.52 | 150 | 6 | 100 | 0 | 1 | 150 | 5049 | 5198 | Bovine viral diarrhea virus 1b strain BJ-11, complete genome | blastn | 14928 | 244 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23100324 | 23100324 | PRJNA1001940_S_NODE_8259_length_576_cov_13.649156_g7353_i0 | PRJNA1001940 | 8259 | 576 | 13.649156 | 78.61913856 | Coltivirus dermacentoris | 3428066 | Viruses | Viruses | 638 | 3.4299999999999995e-178 | NTclustered | gi|2758887253|gb|PP473574.1| | 46839 | g7353 | i0 | 92.744 | 61.4461805555556 | 441 | 32 | 77 | 0 | 1 | 441 | 4980 | 4540 | MAG: Colorado tick fever virus isolate HL11 segment 1, complete sequence | blastn | 35393 | 638 | 1 | Viruses | Orthornavirae | Duplornaviricota | Resentoviricetes | Reovirales | Spinareoviridae | Coltivirus | Coltivirus dermacentoris | ||
| 24373239 | 24373239 | PRJNA1001940_S_NODE_23560_length_413_cov_2.400000_g22516_i0 | PRJNA1001940 | 23560 | 413 | 2.4 | 9.912 | Gammaretrovirus murleu | 3428959 | Viruses | Viruses | 721 | 0 | NTclustered | gi|38155068|gb|AY349138.1| | 11786 | g22516 | i0 | 98.305 | 99.8474576271186 | 413 | 3 | 100 | 2 | 1 | 413 | 43 | 451 | Murine leukemia virus isolate SP(B)1-1 truncated gag polypeptide (gag) mRNA, complete cds, alternatively spliced | blastn | 41237 | 721 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 24373412 | 24373412 | PRJNA1001940_S_NODE_3680_length_740_cov_6.499283_g3076_i0 | PRJNA1001940 | 3680 | 740 | 6.499283 | 48.0946942 | Porcine bastrovirus | 2588662 | Viruses | Viruses | 58.4 | 0.002 | NTclustered | gi|1682068313|gb|MK387176.1| | 2588662 | g3076 | i0 | 94.737 | 0.0905405405405405 | 38 | 1 | 5 | 1 | 703 | 740 | 49 | 13 | Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome | blastn | 67 | 58.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Stellavirales | Astroviridae | Porcine bastrovirus | |||
| 24373688 | 24373688 | PRJNA1001940_S_NODE_5640_length_648_cov_2.788430_g4874_i0 | PRJNA1001940 | 5640 | 648 | 2.78843 | 18.0690264 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1031 | 0 | NTclustered | gi|575471150|gb|KF772785.1| | 11099 | g4874 | i0 | 95.37 | 99.9938271604938 | 648 | 30 | 100 | 0 | 1 | 648 | 2003 | 1356 | Bovine viral diarrhea virus 1 isolate CC13B, complete genome | blastn | 64796 | 1031 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24374001 | 24374001 | PRJNA1001940_S_NODE_7780_length_587_cov_13.253676_g4627_i2 | PRJNA1001940 | 7780 | 587 | 13.253676 | 77.79907812 | Pestivirus bovis | 3052619 | Viruses | Viruses | 946 | 0 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g4627 | i2 | 95.741 | 100.003407155026 | 587 | 25 | 100 | 0 | 1 | 587 | 2032 | 1446 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 58702 | 946 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24374346 | 24374346 | PRJNA1001940_S_NODE_99420_length_217_cov_4.212644_g98366_i0 | PRJNA1001940 | 99420 | 217 | 4.212644 | 9.14143748 | Bacteriophage sp. | 38018 | Viruses | Viruses | 54.7 | 0.005 | NTclustered | gi|2057076630|tpg|BK037829.1| | 38018 | g98366 | i0 | 100 | 0.52073732718894 | 29 | 0 | 13 | 0 | 41 | 69 | 7630 | 7658 | MAG TPA_asm: Bacteriophage sp. isolate ctiyJ22, partial genome | blastn | 113 | 54.7 | 1 | Viruses | Bacteriophage sp. | ||||||||
| 25225616 | 25225616 | PRJNA1001940_S_NODE_187120_length_158_cov_2.713043_g186066_i0 | PRJNA1001940 | 187120 | 158 | 2.713043 | 4.28660794 | Pestivirus | 11095 | Viruses | Viruses | 287 | 3.29e-73 | NTclustered | gi|1628570|gb|U63512.1|BVU63512 | 11099 | g186066 | i0 | 99.367 | 99.9050632911392 | 158 | 1 | 100 | 0 | 1 | 158 | 4430 | 4273 | Bovine viral diarrhea virus cytopathogenic strain CP7, polyprotein gene, E2 region to NS4B, partial cds | blastn | 15785 | 287 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;