contig_metadata
62 rows where analysis = "blastn", bioproject = "PRJNA1001940" and tax_phylum = "Kitrinoviricota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145747 | 145747 | PRJNA1001940_S_NODE_111521_length_205_cov_2.074074_g110467_i0 | PRJNA1001940 | 111521 | 205 | 2.074074 | 4.2518517 | Pestivirus bovis | 3052619 | Viruses | Viruses | 235 | 1.6599999999999997e-57 | NTclustered | gi|1129880379|gb|KX170557.1| | 11099 | g110467 | i0 | 92.638 | 79.0926829268293 | 163 | 12 | 80 | 0 | 1 | 163 | 15 | 177 | Bovine viral diarrhea virus 1 isolate V045 NS4B gene, partial cds | blastn | 16214 | 235 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 145764 | 145764 | PRJNA1001940_S_NODE_112541_length_204_cov_2.385093_g111487_i0 | PRJNA1001940 | 112541 | 204 | 2.385093 | 4.86558972 | Pestivirus bovis | 3052619 | Viruses | Viruses | 350 | 5.64e-92 | NTclustered | gi|1129880577|gb|KX170656.1| | 11099 | g111487 | i0 | 97.549 | 99.5637254901961 | 204 | 5 | 100 | 0 | 1 | 204 | 691 | 894 | Bovine viral diarrhea virus 1 isolate V015 NS5B gene, partial cds | blastn | 20311 | 350 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 146529 | 146529 | PRJNA1001940_S_NODE_164181_length_169_cov_3.428571_g163127_i0 | PRJNA1001940 | 164181 | 169 | 3.428571 | 5.79428499 | Pestivirus tauri | 3052626 | Viruses | Viruses | 302 | 1.27e-77 | NTclustered | gi|1540352893|gb|MH231138.1| | 54315 | g163127 | i0 | 98.817 | 98.6272189349112 | 169 | 2 | 100 | 0 | 1 | 169 | 2250 | 2418 | Bovine viral diarrhea virus 2 isolate MnFetus polyprotein gene, complete cds | blastn | 16668 | 302 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 147091 | 147091 | PRJNA1001940_S_NODE_203541_length_152_cov_4.366972_g202487_i0 | PRJNA1001940 | 203541 | 152 | 4.366972 | 6.63779744 | Pestivirus bovis | 3052619 | Viruses | Viruses | 261 | 1.9e-65 | NTclustered | gi|806984026|gb|KP756298.1| | 11099 | g202487 | i0 | 98 | 98.9342105263158 | 150 | 3 | 99 | 0 | 3 | 152 | 1080 | 931 | Bovine viral diarrhea virus 1 isolate PI9_MLN_10 nonstructural protein NS5b gene, partial cds | blastn | 15038 | 261 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 147422 | 147422 | PRJNA1001940_S_NODE_31241_length_372_cov_5.893617_g30190_i0 | PRJNA1001940 | 31241 | 372 | 5.893617 | 21.92425524 | Pestivirus bovis | 3052619 | Viruses | Viruses | 588 | 2.1799999999999993e-163 | NTclustered | gi|1129879711|gb|KX170223.1| | 11099 | g30190 | i0 | 95.161 | 99.0564516129032 | 372 | 18 | 100 | 0 | 1 | 372 | 150 | 521 | Bovine viral diarrhea virus 1 isolate V015 Erns gene, partial cds | blastn | 36849 | 588 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1422340 | 1422340 | PRJNA1001940_S_NODE_46902_length_314_cov_2.409594_g45848_i0 | PRJNA1001940 | 46902 | 314 | 2.409594 | 7.56612516 | Pestivirus bovis | 3052619 | Viruses | Viruses | 486 | 6.7999999999999986e-133 | NTclustered | gi|1350888790|gb|KY852366.1| | 11099 | g45848 | i0 | 94.586 | 99.9044585987261 | 314 | 17 | 100 | 0 | 1 | 314 | 34 | 347 | Bovine viral diarrhea virus 1 isolate S1118 E2 glycoprotein gene, partial cds | blastn | 31370 | 486 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2696113 | 2696113 | PRJNA1001940_S_NODE_128943_length_191_cov_1.621622_g127889_i0 | PRJNA1001940 | 128943 | 191 | 1.621622 | 3.09729802 | Pestivirus bovis | 3052619 | Viruses | Viruses | 324 | 3.1499999999999997e-84 | NTclustered | gi|2553477538|gb|OR004812.1| | 11099 | g127889 | i0 | 97.368 | 99.434554973822 | 190 | 5 | 99 | 0 | 2 | 191 | 5306 | 5495 | Bovine viral diarrhea virus 1 isolate TJ2108, complete genome | blastn | 18992 | 324 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2698172 | 2698172 | PRJNA1001940_S_NODE_76703_length_248_cov_2.429268_g75649_i0 | PRJNA1001940 | 76703 | 248 | 2.429268 | 6.02458464 | Pestivirus bovis | 3052619 | Viruses | Viruses | 387 | 5.409999999999998e-103 | NTclustered | gi|1129879913|gb|KX170324.1| | 11099 | g75649 | i0 | 95.102 | 98.6572580645161 | 245 | 12 | 99 | 0 | 4 | 248 | 181 | 425 | Bovine viral diarrhea virus 1 isolate V083 Npro gene, partial cds | blastn | 24467 | 387 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3550068 | 3550068 | PRJNA1001940_S_NODE_17643_length_456_cov_2.467312_g16610_i0 | PRJNA1001940 | 17643 | 456 | 2.467312 | 11.25094272 | Pestivirus | 11095 | Viruses | Viruses | 771 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g16610 | i0 | 97.351 | 99.0548245614035 | 453 | 12 | 99 | 0 | 1 | 453 | 8006 | 8458 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 45169 | 771 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3550167 | 3550167 | PRJNA1001940_S_NODE_3683_length_740_cov_4.131994_g3079_i0 | PRJNA1001940 | 3683 | 740 | 4.131994 | 30.5767556 | Pestivirus | 11095 | Viruses | Viruses | 1118 | 0 | NTclustered | gi|1129879567|gb|KX170151.1| | 11099 | g3079 | i0 | 93.927 | 100.068918918919 | 741 | 43 | 100 | 2 | 1 | 740 | 1033 | 294 | Bovine viral diarrhea virus 1 isolate V020 E2 gene, partial cds | blastn | 74051 | 1118 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3972842 | 3972842 | PRJNA1001940_S_NODE_164464_length_169_cov_2.111111_g163410_i0 | PRJNA1001940 | 164464 | 169 | 2.111111 | 3.56777759 | Pestivirus bovis | 3052619 | Viruses | Viruses | 274 | 2.7699999999999997e-69 | NTclustered | gi|2419860346|dbj|LC727644.1| | 11099 | g163410 | i0 | 95.858 | 93.414201183432 | 169 | 7 | 100 | 0 | 1 | 169 | 11705 | 11537 | Bovine viral diarrhea virus 1 Tokachi-8 RNA, nearly complete genome | blastn | 15787 | 274 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3973360 | 3973360 | PRJNA1001940_S_NODE_199904_length_153_cov_1.309091_g198850_i0 | PRJNA1001940 | 199904 | 153 | 1.309091 | 2.00290923 | Pestivirus bovis | 3052619 | Viruses | Viruses | 228 | 1.9399999999999995e-55 | NTclustered | gi|1248821481|emb|LT907991.1| | 11099 | g198850 | i0 | 93.464 | 56.4771241830065 | 153 | 10 | 100 | 0 | 1 | 153 | 1713 | 1561 | Bovine viral diarrhea virus 1 isolate VE_138cp_05 genome assembly, complete genome: monopartite | blastn | 8641 | 228 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5250440 | 5250440 | PRJNA1001940_S_NODE_44585_length_321_cov_3.241007_g43531_i0 | PRJNA1001940 | 44585 | 321 | 3.241007 | 10.40363247 | Pestivirus bovis | 3052619 | Viruses | Viruses | 490 | 5.39e-134 | NTclustered | gi|1732630643|gb|MK509774.1| | 981676 | g43531 | i0 | 94.357 | 99.3613707165109 | 319 | 18 | 99 | 0 | 1 | 319 | 1739 | 1421 | Bovine viral diarrhea virus 1b isolate BVD1b-JH, complete genome | blastn | 31895 | 490 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7377087 | 7377087 | PRJNA1001940_S_NODE_4766_length_681_cov_28.531348_g344_i4 | PRJNA1001940 | 4766 | 681 | 28.531348 | 194.29847988 | Pestivirus | 11095 | Viruses | Viruses | 1136 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g344 | i4 | 97.876 | 89.2672540381791 | 659 | 10 | 96 | 2 | 1 | 656 | 658 | 1 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 60791 | 1136 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7798344 | 7798344 | PRJNA1001940_S_NODE_12167_length_513_cov_6.789362_g11177_i0 | PRJNA1001940 | 12167 | 513 | 6.789362 | 34.82942706 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.014 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g11177 | i0 | 100 | 0.0565302144249513 | 29 | 0 | 6 | 0 | 485 | 513 | 34 | 6 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 7798779 | 7798779 | PRJNA1001940_S_NODE_148167_length_178_cov_4.459259_g147113_i0 | PRJNA1001940 | 148167 | 178 | 4.459259 | 7.93748102 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.004 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g147113 | i0 | 100 | 0.792134831460674 | 29 | 0 | 16 | 0 | 150 | 178 | 41 | 13 | Carnation latent virus isolate KL, complete genome | blastn | 141 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 8652695 | 8652695 | PRJNA1001940_S_NODE_3587_length_746_cov_57.675676_g344_i3 | PRJNA1001940 | 3587 | 746 | 57.675676 | 430.26054296 | Pestivirus | 11095 | Viruses | Viruses | 1223 | 0 | NTclustered | gi|2858850729|gb|PQ613798.1| | 11099 | g344 | i3 | 96.247 | 99.8351206434316 | 746 | 28 | 100 | 0 | 1 | 746 | 1251 | 506 | Bovine viral diarrhea virus 1 isolate USMARC/PI-92-21/Serum polyprotein gene, complete cds | blastn | 74477 | 1223 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9072978 | 9072978 | PRJNA1001940_S_NODE_100688_length_216_cov_1.757225_g99634_i0 | PRJNA1001940 | 100688 | 216 | 1.757225 | 3.795606 | Pestivirus bovis | 3052619 | Viruses | Viruses | 348 | 2.1700000000000002e-91 | NTclustered | gi|323225|gb|M96638.1|BVDP2014A | 11099 | g99634 | i0 | 95.814 | 101.361111111111 | 215 | 9 | 99 | 0 | 1 | 215 | 531 | 317 | Bovine viral diarrhea virus nonstructural protein (p20) gene; structural protein (p14) gene, partial ORF | blastn | 21894 | 348 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9074471 | 9074471 | PRJNA1001940_S_NODE_2008_length_885_cov_19.973872_g344_i1 | PRJNA1001940 | 2008 | 885 | 19.973872 | 176.7687672 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1395 | 0 | NTclustered | gi|800924330|gb|KP941590.1| | 11099 | g344 | i1 | 96.244 | 91.0282485875706 | 852 | 31 | 96 | 1 | 34 | 885 | 3 | 853 | Bovine viral diarrhea virus 1 strain USMARC-55924 polyprotein gene, complete cds | blastn | 80560 | 1395 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9074941 | 9074941 | PRJNA1001940_S_NODE_37128_length_348_cov_1.354098_g36074_i0 | PRJNA1001940 | 37128 | 348 | 1.354098 | 4.71226104 | Pestivirus bovis | 3052619 | Viruses | Viruses | 339 | 2.2599999999999997e-88 | NTclustered | gi|800924312|gb|KP941581.1| | 11099 | g36074 | i0 | 97.015 | 93.0948275862069 | 201 | 6 | 100 | 0 | 1 | 201 | 5408 | 5608 | Bovine viral diarrhea virus 1 strain USMARC-51998 polyprotein gene, complete cds | blastn | 32397 | 339 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9075044 | 9075044 | PRJNA1001940_S_NODE_44328_length_322_cov_2.236559_g43274_i0 | PRJNA1001940 | 44328 | 322 | 2.236559 | 7.20171998 | Pestivirus bovis | 3052619 | Viruses | Viruses | 545 | 1.14e-150 | NTclustered | gi|1129880485|gb|KX170610.1| | 11099 | g43274 | i0 | 97.205 | 100 | 322 | 9 | 100 | 0 | 1 | 322 | 580 | 259 | Bovine viral diarrhea virus 1 isolate V070 NS5A gene, partial cds | blastn | 32200 | 545 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9075571 | 9075571 | PRJNA1001940_S_NODE_8168_length_578_cov_14.745794_g4627_i3 | PRJNA1001940 | 8168 | 578 | 14.745794 | 85.23068932 | Pestivirus bovis | 3052619 | Viruses | Viruses | 968 | 0 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g4627 | i3 | 96.886 | 99.9948096885813 | 578 | 18 | 100 | 0 | 1 | 578 | 1623 | 2200 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 57797 | 968 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9927363 | 9927363 | PRJNA1001940_S_NODE_100248_length_216_cov_7.208092_g99194_i0 | PRJNA1001940 | 100248 | 216 | 7.208092 | 15.56947872 | Pestivirus | 11095 | Viruses | Viruses | 339 | 1.3099999999999998e-88 | NTclustered | gi|2858850717|gb|PQ613792.1| | 11099 | g99194 | i0 | 94.907 | 99.8425925925926 | 216 | 11 | 100 | 0 | 1 | 216 | 9693 | 9908 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds | blastn | 21566 | 339 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 10350482 | 10350482 | PRJNA1001940_S_NODE_22389_length_420_cov_7.994695_g21347_i0 | PRJNA1001940 | 22389 | 420 | 7.994695 | 33.577719 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.011 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g21347 | i0 | 100 | 0.135714285714286 | 29 | 0 | 7 | 0 | 392 | 420 | 34 | 6 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 57 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 10351127 | 10351127 | PRJNA1001940_S_NODE_69489_length_261_cov_1.321101_g68435_i0 | PRJNA1001940 | 69489 | 261 | 1.321101 | 3.44807361 | Pestivirus tauri | 3052626 | Viruses | Viruses | 466 | 7.17e-127 | NTclustered | gi|737515360|dbj|AB894423.1| | 54315 | g68435 | i0 | 98.851 | 99.992337164751 | 261 | 3 | 100 | 0 | 1 | 261 | 4589 | 4849 | Bovine viral diarrhea virus 2 genomic RNA, complete genome, strain: GBK_E+ | blastn | 26098 | 466 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 10351220 | 10351220 | PRJNA1001940_S_NODE_7549_length_592_cov_16.491803_g4627_i1 | PRJNA1001940 | 7549 | 592 | 16.491803 | 97.63147376 | Pestivirus bovis | 3052619 | Viruses | Viruses | 989 | 0 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g4627 | i1 | 96.791 | 99.9628378378378 | 592 | 19 | 100 | 0 | 1 | 592 | 1441 | 2032 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 59178 | 989 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11202852 | 11202852 | PRJNA1001940_S_NODE_4769_length_681_cov_24.152038_g344_i5 | PRJNA1001940 | 4769 | 681 | 24.152038 | 164.47537878 | Pestivirus | 11095 | Viruses | Viruses | 1120 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g344 | i5 | 97.42 | 89.496328928047 | 659 | 13 | 96 | 2 | 1 | 656 | 658 | 1 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 60947 | 1120 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11624317 | 11624317 | PRJNA1001940_S_NODE_117270_length_200_cov_1.834395_g116216_i0 | PRJNA1001940 | 117270 | 200 | 1.834395 | 3.66879 | Pestivirus bovis | 3052619 | Viruses | Viruses | 248 | 2.06e-61 | NTclustered | gi|1129879631|gb|KX170183.1| | 11099 | g116216 | i0 | 89 | 54.135 | 200 | 22 | 100 | 0 | 1 | 200 | 719 | 520 | Bovine viral diarrhea virus 1 isolate V008 E2 gene, partial cds | blastn | 10827 | 248 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11625924 | 11625924 | PRJNA1001940_S_NODE_28770_length_384_cov_3.683284_g27721_i0 | PRJNA1001940 | 28770 | 384 | 3.683284 | 14.14381056 | Pestivirus bovis | 3052619 | Viruses | Viruses | 654 | 0 | NTclustered | gi|800924312|gb|KP941581.1| | 11099 | g27721 | i0 | 97.396 | 99.8697916666667 | 384 | 10 | 100 | 0 | 1 | 384 | 3925 | 4308 | Bovine viral diarrhea virus 1 strain USMARC-51998 polyprotein gene, complete cds | blastn | 38350 | 654 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12478410 | 12478410 | PRJNA1001940_S_NODE_22150_length_422_cov_3.137203_g21108_i0 | PRJNA1001940 | 22150 | 422 | 3.137203 | 13.23899666 | Pestivirus | 11095 | Viruses | Viruses | 641 | 1.9e-179 | NTclustered | gi|800924324|gb|KP941587.1| | 11099 | g21108 | i0 | 94.076 | 99.8578199052133 | 422 | 25 | 100 | 0 | 1 | 422 | 8829 | 8408 | Bovine viral diarrhea virus 1 strain USMARC-55478 polyprotein gene, complete cds | blastn | 42140 | 641 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12478448 | 12478448 | PRJNA1001940_S_NODE_450_length_1323_cov_30.116406_g344_i0 | PRJNA1001940 | 450 | 1323 | 30.116406 | 398.44005138 | Pestivirus | 11095 | Viruses | Viruses | 2106 | 0 | NTclustered | gi|575471150|gb|KF772785.1| | 11099 | g344 | i0 | 95.994 | 91.1798941798942 | 1298 | 48 | 98 | 3 | 26 | 1323 | 1 | 1294 | Bovine viral diarrhea virus 1 isolate CC13B, complete genome | blastn | 120631 | 2106 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12900876 | 12900876 | PRJNA1001940_S_NODE_214131_length_150_cov_1.794393_g213077_i0 | PRJNA1001940 | 214131 | 150 | 1.794393 | 2.6915895 | Tobamovirus capsici | 3432865 | Viruses | Viruses | 270 | 3.1e-68 | NTclustered | gi|2432630479|gb|OQ160839.1| | 12239 | g213077 | i0 | 99.333 | 90.4266666666667 | 150 | 0 | 100 | 1 | 1 | 150 | 323 | 175 | MAG: Pepper mild mottle virus isolate 41115269 RNA-dependent RNA polymerase, Small replicase subunit, movement protein, and coat protein genes, complete cds | blastn | 13564 | 270 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus capsici | ||
| 12901216 | 12901216 | PRJNA1001940_S_NODE_45131_length_319_cov_7.851449_g44077_i0 | PRJNA1001940 | 45131 | 319 | 7.851449 | 25.04612231 | Pestivirus bovis | 3052619 | Viruses | Viruses | 534 | 2.44e-147 | NTclustered | gi|1350888790|gb|KY852366.1| | 11099 | g44077 | i0 | 96.865 | 99.7742946708464 | 319 | 10 | 100 | 0 | 1 | 319 | 352 | 34 | Bovine viral diarrhea virus 1 isolate S1118 E2 glycoprotein gene, partial cds | blastn | 31828 | 534 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12901736 | 12901736 | PRJNA1001940_S_NODE_81131_length_241_cov_2.424242_g80077_i0 | PRJNA1001940 | 81131 | 241 | 2.424242 | 5.84242322 | Pestivirus bovis | 3052619 | Viruses | Viruses | 396 | 8.7e-106 | NTclustered | gi|118498778|gb|EF101530.1| | 11099 | g80077 | i0 | 96.266 | 83.6721991701245 | 241 | 9 | 100 | 0 | 1 | 241 | 878 | 638 | Bovine viral diarrhea virus 1 strain KE9, complete genome | blastn | 20165 | 396 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14174362 | 14174362 | PRJNA1001940_S_NODE_116852_length_200_cov_4.961783_g115798_i0 | PRJNA1001940 | 116852 | 200 | 4.961783 | 9.923566 | Pestivirus bovis | 3052619 | Viruses | Viruses | 348 | 1.98e-91 | NTclustered | gi|1036031867|gb|AH012705.2| | 11099 | g115798 | i0 | 98 | 99.055 | 200 | 4 | 100 | 0 | 1 | 200 | 5106 | 4907 | Bovine viral diarrhea virus 1 strain CP8 polyprotein genes, partial cds | blastn | 19811 | 348 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14176171 | 14176171 | PRJNA1001940_S_NODE_45772_length_317_cov_4.806569_g44718_i0 | PRJNA1001940 | 45772 | 317 | 4.806569 | 15.23682373 | Pestivirus bovis | 3052619 | Viruses | Viruses | 514 | 3.15e-141 | NTclustered | gi|1129880481|gb|KX170608.1| | 11099 | g44718 | i0 | 95.899 | 99.9242902208202 | 317 | 13 | 100 | 0 | 1 | 317 | 454 | 138 | Bovine viral diarrhea virus 1 isolate V031 NS5A gene, partial cds | blastn | 31676 | 514 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14176276 | 14176276 | PRJNA1001940_S_NODE_53172_length_297_cov_1.440945_g52118_i0 | PRJNA1001940 | 53172 | 297 | 1.440945 | 4.27960665 | Pestivirus bovis | 3052619 | Viruses | Viruses | 505 | 1.7599999999999995e-138 | NTclustered | gi|2419860346|dbj|LC727644.1| | 11099 | g52118 | i0 | 97.627 | 99.2828282828283 | 295 | 6 | 99 | 1 | 1 | 294 | 7065 | 7359 | Bovine viral diarrhea virus 1 Tokachi-8 RNA, nearly complete genome | blastn | 29487 | 505 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15027493 | 15027493 | PRJNA1001940_S_NODE_97732_length_219_cov_2.829545_g96678_i0 | PRJNA1001940 | 97732 | 219 | 2.829545 | 6.19670355 | Pestivirus | 11095 | Viruses | Viruses | 361 | 2.83e-95 | NTclustered | gi|1129880363|gb|KX170549.1| | 11099 | g96678 | i0 | 96.347 | 99.8812785388128 | 219 | 8 | 100 | 0 | 1 | 219 | 458 | 676 | Bovine viral diarrhea virus 1 isolate V070 NS4B gene, partial cds | blastn | 21874 | 361 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15449361 | 15449361 | PRJNA1001940_S_NODE_172173_length_165_cov_2.754098_g171119_i0 | PRJNA1001940 | 172173 | 165 | 2.754098 | 4.5442617 | Pestivirus bovis | 3052619 | Viruses | Viruses | 283 | 4.4899999999999995e-72 | NTclustered | gi|2419860354|dbj|LC727648.1| | 11099 | g171119 | i0 | 97.576 | 99.7333333333333 | 165 | 4 | 100 | 0 | 1 | 165 | 10899 | 10735 | Bovine viral diarrhea virus 1 Tokachi-27 RNA, nearly complete genome | blastn | 16456 | 283 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15450266 | 15450266 | PRJNA1001940_S_NODE_40353_length_335_cov_12.061644_g39299_i0 | PRJNA1001940 | 40353 | 335 | 12.061644 | 40.4065074 | Pestivirus bovis | 3052619 | Viruses | Viruses | 569 | 7.049999999999998e-158 | NTclustered | gi|1350888790|gb|KY852366.1| | 11099 | g39299 | i0 | 97.313 | 99.8417910447761 | 335 | 9 | 100 | 0 | 1 | 335 | 352 | 18 | Bovine viral diarrhea virus 1 isolate S1118 E2 glycoprotein gene, partial cds | blastn | 33447 | 569 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15450554 | 15450554 | PRJNA1001940_S_NODE_6073_length_634_cov_8.170897_g5274_i0 | PRJNA1001940 | 6073 | 634 | 8.170897 | 51.80348698 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.018 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g5274 | i0 | 100 | 0.0457413249211356 | 29 | 0 | 5 | 0 | 606 | 634 | 34 | 6 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 16302004 | 16302004 | PRJNA1001940_S_NODE_17793_length_454_cov_10.306569_g16759_i0 | PRJNA1001940 | 17793 | 454 | 10.306569 | 46.79182326 | Pestivirus | 11095 | Viruses | Viruses | 778 | 0 | NTclustered | gi|1129880599|gb|KX170667.1| | 11099 | g16759 | i0 | 97.577 | 99.9867841409692 | 454 | 11 | 100 | 0 | 1 | 454 | 1803 | 1350 | Bovine viral diarrhea virus 1 isolate V075 NS5B gene, partial cds | blastn | 45394 | 784 | 0.99234693877551 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16302155 | 16302155 | PRJNA1001940_S_NODE_77193_length_247_cov_5.039216_g76139_i0 | PRJNA1001940 | 77193 | 247 | 5.039216 | 12.44686352 | Pestivirus | 11095 | Viruses | Viruses | 368 | 1.95e-97 | NTclustered | gi|800924324|gb|KP941587.1| | 11099 | g76139 | i0 | 93.522 | 99.5748987854251 | 247 | 16 | 100 | 0 | 1 | 247 | 602 | 848 | Bovine viral diarrhea virus 1 strain USMARC-55478 polyprotein gene, complete cds | blastn | 24595 | 368 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16723044 | 16723044 | PRJNA1001940_S_NODE_141554_length_182_cov_4.323741_g140500_i0 | PRJNA1001940 | 141554 | 182 | 4.323741 | 7.86920862 | Pestivirus bovis | 3052619 | Viruses | Viruses | 303 | 3.87e-78 | NTclustered | gi|2858850717|gb|PQ613792.1| | 11099 | g140500 | i0 | 96.703 | 99.8681318681319 | 182 | 6 | 100 | 0 | 1 | 182 | 2099 | 2280 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds | blastn | 18176 | 303 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16724171 | 16724171 | PRJNA1001940_S_NODE_22034_length_423_cov_1.894737_g20992_i0 | PRJNA1001940 | 22034 | 423 | 1.894737 | 8.01473751 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.011 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g20992 | i0 | 100 | 0.333333333333333 | 29 | 0 | 7 | 0 | 395 | 423 | 41 | 13 | Carnation latent virus isolate KL, complete genome | blastn | 141 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 17577281 | 17577281 | PRJNA1001940_S_NODE_1454_length_971_cov_10.003233_g1158_i0 | PRJNA1001940 | 1454 | 971 | 10.003233 | 97.13139243 | Pestivirus | 11095 | Viruses | Viruses | 1550 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g1158 | i0 | 95.469 | 99.994850669413 | 971 | 44 | 100 | 0 | 1 | 971 | 9613 | 10583 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 97095 | 1550 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 18851157 | 18851157 | PRJNA1001940_S_NODE_15555_length_474_cov_12.823666_g14528_i0 | PRJNA1001940 | 15555 | 474 | 12.823666 | 60.78417684 | Pestivirus | 11095 | Viruses | Viruses | 737 | 0 | NTclustered | gi|386285713|gb|JQ418634.1| | 11099 | g14528 | i0 | 94.904 | 99.915611814346 | 471 | 24 | 99 | 0 | 1 | 471 | 1759 | 2229 | Bovine viral diarrhea virus 1 isolate 08GB45-2 polyprotein gene, complete cds | blastn | 47360 | 737 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19271910 | 19271910 | PRJNA1001940_S_NODE_15356_length_476_cov_7.346420_g14329_i0 | PRJNA1001940 | 15356 | 476 | 7.34642 | 34.9689592 | Pestivirus bovis | 3052619 | Viruses | Viruses | 680 | 0 | NTclustered | gi|2858850691|gb|PQ613779.1| | 11099 | g14329 | i0 | 92.437 | 99.8760504201681 | 476 | 36 | 100 | 0 | 1 | 476 | 2082 | 2557 | Bovine viral diarrhea virus 1 isolate USMARC/PI-86-21/Serum polyprotein gene, complete cds | blastn | 47541 | 680 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19273640 | 19273640 | PRJNA1001940_S_NODE_78096_length_246_cov_1.738916_g77042_i0 | PRJNA1001940 | 78096 | 246 | 1.738916 | 4.27773336 | Pestivirus bovis | 3052619 | Viruses | Viruses | 388 | 1.49e-103 | NTclustered | gi|323212|gb|M87808.1|BVDMSEQD | 11099 | g77042 | i0 | 95.122 | 100.922764227642 | 246 | 12 | 100 | 0 | 1 | 246 | 337 | 92 | Bovine viral diarrhea virus mRNA sequence | blastn | 24827 | 388 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20126021 | 20126021 | PRJNA1001940_S_NODE_200496_length_153_cov_1.309091_g199442_i0 | PRJNA1001940 | 200496 | 153 | 1.309091 | 2.00290923 | Pestivirus | 11095 | Viruses | Viruses | 261 | 1.91e-65 | NTclustered | gi|1628570|gb|U63512.1|BVU63512 | 11099 | g199442 | i0 | 97.386 | 99.1307189542484 | 153 | 4 | 100 | 0 | 1 | 153 | 2005 | 2157 | Bovine viral diarrhea virus cytopathogenic strain CP7, polyprotein gene, E2 region to NS4B, partial cds | blastn | 15167 | 261 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20126081 | 20126081 | PRJNA1001940_S_NODE_4156_length_712_cov_8.805680_g3502_i0 | PRJNA1001940 | 4156 | 712 | 8.80568 | 62.6964416 | root | 1 | Root_unresolved | Root_unresolved | 1122 | 0 | NTclustered | gi|507866705|gb|KC695815.1| | 11099 | g3502 | i0 | 95.205 | 97.2879213483146 | 709 | 34 | 99 | 0 | 1 | 709 | 76 | 784 | Bovine viral diarrhea virus 1 isolate Av69 SD-1 polyprotein gene, partial cds | blastn | 69269 | 1127 | 0.995563442768412 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20126156 | 20126156 | PRJNA1001940_S_NODE_9756_length_549_cov_3.786561_g4874_i1 | PRJNA1001940 | 9756 | 549 | 3.786561 | 20.78821989 | Pestivirus | 11095 | Viruses | Viruses | 870 | 0 | NTclustered | gi|2149466|gb|U86599.1|PTU86599 | 11099 | g4874 | i1 | 95.264 | 99.9908925318761 | 549 | 26 | 100 | 0 | 1 | 549 | 2007 | 1459 | Pestivirus type 1 cytopathic genomic RNA, complete genome | blastn | 54895 | 870 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20547296 | 20547296 | PRJNA1001940_S_NODE_139617_length_184_cov_1.021277_g138563_i0 | PRJNA1001940 | 139617 | 184 | 1.021277 | 1.87914968 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.004 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g138563 | i0 | 100 | 0.766304347826087 | 29 | 0 | 16 | 0 | 156 | 184 | 41 | 13 | Carnation latent virus isolate KL, complete genome | blastn | 141 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 20548888 | 20548888 | PRJNA1001940_S_NODE_5377_length_658_cov_14.556098_g4627_i0 | PRJNA1001940 | 5377 | 658 | 14.556098 | 95.77912484 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1088 | 0 | NTclustered | gi|530291193|gb|KC963967.1| | 11099 | g4627 | i0 | 96.505 | 100 | 658 | 23 | 100 | 0 | 1 | 658 | 4715 | 4058 | Bovine viral diarrhea virus 1 isolate 12F004, complete genome | blastn | 65800 | 1088 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20549323 | 20549323 | PRJNA1001940_S_NODE_84417_length_236_cov_3.854922_g83363_i0 | PRJNA1001940 | 84417 | 236 | 3.854922 | 9.09761592 | Pestivirus bovis | 3052619 | Viruses | Viruses | 394 | 3.05e-105 | NTclustered | gi|2858850717|gb|PQ613792.1| | 11099 | g83363 | i0 | 97.009 | 99.1101694915254 | 234 | 7 | 99 | 0 | 1 | 234 | 1111 | 1344 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds | blastn | 23390 | 394 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21401658 | 21401658 | PRJNA1001940_S_NODE_2917_length_795_cov_21.376330_g344_i2 | PRJNA1001940 | 2917 | 795 | 21.37633 | 169.9418235 | Pestivirus | 11095 | Viruses | Viruses | 1254 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g344 | i2 | 96.224 | 90.1396226415094 | 768 | 25 | 96 | 2 | 6 | 770 | 767 | 1 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 71661 | 1254 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 22676466 | 22676466 | PRJNA1001940_S_NODE_45758_length_317_cov_5.580292_g44704_i0 | PRJNA1001940 | 45758 | 317 | 5.580292 | 17.68952564 | Pestivirus | 11095 | Viruses | Viruses | 503 | 6.82e-138 | NTclustered | gi|2419860348|dbj|LC727645.1| | 11099 | g44704 | i0 | 95.268 | 99.9085173501577 | 317 | 15 | 100 | 0 | 1 | 317 | 7970 | 7654 | Bovine viral diarrhea virus 1 Tokachi-13 RNA, nearly complete genome | blastn | 31671 | 508 | 0.990157480314961 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23097683 | 23097683 | PRJNA1001940_S_NODE_100599_length_216_cov_1.942197_g99545_i0 | PRJNA1001940 | 100599 | 216 | 1.942197 | 4.19514552 | Pestivirus bovis | 3052619 | Viruses | Viruses | 322 | 1.32e-83 | NTclustered | gi|2743179413|gb|PP856400.1| | 11099 | g99545 | i0 | 93.897 | 77.6805555555556 | 213 | 13 | 99 | 0 | 4 | 216 | 8586 | 8374 | Bovine viral diarrhea virus 1 strain PZ29, partial genome | blastn | 16779 | 322 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23099404 | 23099404 | PRJNA1001940_S_NODE_215099_length_150_cov_1.345794_g214045_i0 | PRJNA1001940 | 215099 | 150 | 1.345794 | 2.018691 | Pestivirus bovis | 3052619 | Viruses | Viruses | 244 | 1.88e-60 | NTclustered | gi|2666910701|gb|PP213451.1| | 981676 | g214045 | i0 | 96 | 99.52 | 150 | 6 | 100 | 0 | 1 | 150 | 5049 | 5198 | Bovine viral diarrhea virus 1b strain BJ-11, complete genome | blastn | 14928 | 244 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24373688 | 24373688 | PRJNA1001940_S_NODE_5640_length_648_cov_2.788430_g4874_i0 | PRJNA1001940 | 5640 | 648 | 2.78843 | 18.0690264 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1031 | 0 | NTclustered | gi|575471150|gb|KF772785.1| | 11099 | g4874 | i0 | 95.37 | 99.9938271604938 | 648 | 30 | 100 | 0 | 1 | 648 | 2003 | 1356 | Bovine viral diarrhea virus 1 isolate CC13B, complete genome | blastn | 64796 | 1031 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24374001 | 24374001 | PRJNA1001940_S_NODE_7780_length_587_cov_13.253676_g4627_i2 | PRJNA1001940 | 7780 | 587 | 13.253676 | 77.79907812 | Pestivirus bovis | 3052619 | Viruses | Viruses | 946 | 0 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g4627 | i2 | 95.741 | 100.003407155026 | 587 | 25 | 100 | 0 | 1 | 587 | 2032 | 1446 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 58702 | 946 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 25225616 | 25225616 | PRJNA1001940_S_NODE_187120_length_158_cov_2.713043_g186066_i0 | PRJNA1001940 | 187120 | 158 | 2.713043 | 4.28660794 | Pestivirus | 11095 | Viruses | Viruses | 287 | 3.29e-73 | NTclustered | gi|1628570|gb|U63512.1|BVU63512 | 11099 | g186066 | i0 | 99.367 | 99.9050632911392 | 158 | 1 | 100 | 0 | 1 | 158 | 4430 | 4273 | Bovine viral diarrhea virus cytopathogenic strain CP7, polyprotein gene, E2 region to NS4B, partial cds | blastn | 15785 | 287 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;