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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1001940" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA1001940 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1420365 1420365 PRJNA1001940_S_NODE_108822_length_208_cov_1.212121_g107768_i0 PRJNA1001940 108822 208 1.212121 2.52121168 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 58.4 3.92e-4   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g107768 i0 100 0.692307692307692 31 0 15 0 1 31 12 42 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 144 58.4 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
2698098 2698098 PRJNA1001940_S_NODE_7143_length_602_cov_11.525939_g6284_i0 PRJNA1001940 7143 602 11.525939 69.38615278 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.005   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g6284 i0 100 0.0498338870431894 30 0 5 0 573 602 38 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 30 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
6524055 6524055 PRJNA1001940_S_NODE_114186_length_203_cov_1.200000_g113132_i0 PRJNA1001940 114186 203 1.2 2.436 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g113132 i0 100 0.714285714285714 29 0 14 0 1 29 10 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 145 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
6526616 6526616 PRJNA1001940_S_NODE_9786_length_548_cov_11.401980_g8834_i0 PRJNA1001940 9786 548 11.40198 62.4828504 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 935 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g8834 i0 97.445 964.782846715328 548 14 100 0 1 548 1346 799 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 528701 935 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
9074746 9074746 PRJNA1001940_S_NODE_22748_length_418_cov_3.704000_g21705_i0 PRJNA1001940 22748 418 3.704 15.48272 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.04   NTclustered gi|145522238|ref|XM_001446932.1| 5888 g21705 i0 100 0.0669856459330144 28 0 7 0 53 80 502 529 Paramecium tetraurelia uncharacterized protein (GSPATT00014518001), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
12900719 12900719 PRJNA1001940_S_NODE_2031_length_883_cov_12.905952_g1629_i0 PRJNA1001940 2031 883 12.905952 113.95955616 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.025   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g1629 i0 100 0.0328425821064553 29 0 3 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
21401585 21401585 PRJNA1001940_S_NODE_162217_length_170_cov_4.913386_g161163_i0 PRJNA1001940 162217 170 4.913386 8.3527562 Paulinella 39716 SAR_Eukaryotes SAR_Eukaryotes 178 2.25e-40   NTclustered gi|238617606|gb|FJ973381.1| 39717 g161163 i0 94.737 65.8823529411765 114 6 67 0 57 170 2560 2447 Paulinella chromatophora strain FK01 28S ribosomal RNA gene, partial sequence blastn 11200 178 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
23098151 23098151 PRJNA1001940_S_NODE_131399_length_189_cov_2.041096_g130345_i0 PRJNA1001940 131399 189 2.041096 3.85767144 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.016   NTclustered gi|2742502725|gb|PP905714.1| 447216 g130345 i0 100 0.296296296296296 28 0 15 0 1 28 1198 1225 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;