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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1000943" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1000943 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
145247 145247 PRJNA1000943_P_NODE_8841_length_279_cov_1.854369_g8703_i0 PRJNA1000943 8841 279 1.854369 5.17368951 Asplanchna sieboldii 84397 Rotifera other_Eukaryota 398 2.8599999999999996e-106   NTclustered gi|61200811|gb|AY829085.1| 84397 g8703 i0 92.226 58.8996415770609 283 18 100 2 1 279 1777 2059 Asplanchna sieboldi 28S ribosomal RNA gene, partial sequence blastn 16433 398 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
5247991 5247991 PRJNA1000943_P_NODE_7965_length_292_cov_1.977169_g7827_i0 PRJNA1000943 7965 292 1.977169 5.77333348 Brachionus koreanus 1199090 Rotifera other_Eukaryota 183 9.2e-42   NTclustered gi|477541861|gb|KC603850.1| 1199090 g7827 i0 78.305 5.83904109589041 295 57 100 7 1 292 6314 6024 Brachionus sp. 'koreanus' chromosome II mitochondrion, complete sequence blastn 1705 183 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus koreanus
6523464 6523464 PRJNA1000943_P_NODE_16026_length_227_cov_2.025974_g15888_i0 PRJNA1000943 16026 227 2.025974 4.59896098 Brachionus plicatilis 10195 Rotifera other_Eukaryota 235 1.87e-57   NTclustered gi|254587481|dbj|AB513493.1| 10195 g15888 i0 86.73 85.8590308370044 211 28 93 0 15 225 57 267 Brachionus plicatilis tef1a mRNA for translation elongation factor 1 alpha, complete cds blastn 19490 235 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
9927270 9927270 PRJNA1000943_P_NODE_9808_length_266_cov_4.808290_g9670_i0 PRJNA1000943 9808 266 4.80829 12.7900514 Ploima 84394 Rotifera other_Eukaryota 379 9.819999999999998e-101   NTclustered gi|61200802|gb|AY829083.1| 96446 g9670 i0 92.481 102.026315789474 266 19 100 1 1 266 1705 1441 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 27139 381 0.994750656167979 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
10348224 10348224 PRJNA1000943_P_NODE_13609_length_246_cov_1.635838_g13471_i0 PRJNA1000943 13609 246 1.635838 4.02416148 Lepadella patella 231622 Rotifera other_Eukaryota 327 3.3e-85   NTclustered gi|83285192|gb|DQ297739.1| 231622 g13471 i0 93.243 86.5975609756098 222 15 90 0 25 246 1 222 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 21303 327 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
11623739 11623739 PRJNA1000943_P_NODE_370_length_1120_cov_105.308500_g305_i0 PRJNA1000943 370 1120 105.3085 1179.4552 Brachionus rubens 392764 Rotifera other_Eukaryota 472 7.389999999999998e-128   NTclustered gi|1802791198|gb|MN256531.1| 392764 g305 i0 82.531 25.3785714285714 561 75 49 18 53 602 11801 11253 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 28424 472 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
12898869 12898869 PRJNA1000943_P_NODE_611_length_913_cov_7.727381_g514_i0 PRJNA1000943 611 913 7.727381 70.55098853 Brachionus plicatilis 10195 Rotifera other_Eukaryota 682 0   NTclustered gi|254587481|dbj|AB513493.1| 10195 g514 i0 81.851 72.3953997809419 821 139 90 7 95 913 1459 647 Brachionus plicatilis tef1a mRNA for translation elongation factor 1 alpha, complete cds blastn 66097 682 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
16721994 16721994 PRJNA1000943_P_NODE_154_length_1522_cov_8.467219_g124_i0 PRJNA1000943 154 1522 8.467219 128.87107318 Asplanchna sp. 3231738 Rotifera other_Eukaryota 1251 0   NTclustered gi|2778092484|gb|PP988072.1| 3231738 g124 i0 82.317 50.0216819973719 1459 242 95 13 8 1455 16 1469 Asplanchna sp. chromosome II mitochondrion, complete sequence blastn 76133 1251 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sp.
19270723 19270723 PRJNA1000943_P_NODE_4136_length_386_cov_1.744409_g3999_i0 PRJNA1000943 4136 386 1.744409 6.73341874 Synchaeta pectinata 525906 Rotifera other_Eukaryota 451 3.11e-122   NTclustered gi|403492659|gb|JX193068.1| 525906 g3999 i0 87.792 98.880829015544 385 47 99 0 1 385 213 597 Synchaeta pectinata isolate A458.2 alpha tubulin gene, partial cds blastn 38168 451 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Synchaetidae Synchaeta Synchaeta pectinata
21822002 21822002 PRJNA1000943_P_NODE_398_length_1087_cov_9.743590_g330_i0 PRJNA1000943 398 1087 9.74359 105.9128233 Brachionus rubens 392764 Rotifera other_Eukaryota 719 0   NTclustered gi|632795126|gb|KJ489417.1| 392764 g330 i0 82.009 18.3247470101196 856 144 78 10 237 1087 870 20 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 19919 719 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
24371022 24371022 PRJNA1000943_P_NODE_2520_length_481_cov_3.686275_g2383_i0 PRJNA1000943 2520 481 3.686275 17.73098275 Brachionus plicatilis 10195 Rotifera other_Eukaryota 287 1.18e-72   NTclustered gi|218117260|emb|AM980958.1| 10195 g2383 i0 79.419 3.06652806652807 413 79 85 6 15 424 410 1 Brachionus plicatilis partial mRNA for 40S ribosomal protein S11, (RPS11 gene) blastn 1475 287 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;