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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1000943" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1000943 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2274402 2274402 PRJNA1000943_P_NODE_9162_length_275_cov_1.440594_g9024_i0 PRJNA1000943 9162 275 1.440594 3.9616335 Gastropoda 6448 Mollusca Mollusca 63.9 1.17e-5   NTclustered gi|2868606537|ref|XM_070329319.1| 31220 g9024 i0 100 0.938181818181818 34 0 12 0 172 205 719 752 PREDICTED: Littorina saxatilis mucin-3A-like (LOC138958216), mRNA blastn 258 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
3971463 3971463 PRJNA1000943_P_NODE_504_length_998_cov_3.148108_g420_i0 PRJNA1000943 504 998 3.148108 31.41811784 Saccostrea cuccullata 36930 Mollusca Mollusca 80.5 4.64e-10   NTclustered gi|2669106401|ref|XM_062732311.1| 36930 g420 i0 73.913 0.230460921843687 230 46 22 13 496 718 546 324 PREDICTED: Saccostrea cucullata large ribosomal subunit protein uL1-like (LOC134249968), mRNA blastn 230 80.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
3971506 3971506 PRJNA1000943_P_NODE_8704_length_281_cov_1.490385_g8566_i0 PRJNA1000943 8704 281 1.490385 4.18798185 Biomphalaria glabrata 6526 Mollusca Mollusca 176 1.47e-39   NTclustered gi|2502097227|ref|XM_013231627.2| 6526 g8566 i0 82.743 33.135231316726 226 12 72 16 26 227 2613 2391 PREDICTED: Biomphalaria glabrata mucin-2-like (LOC106071503), mRNA blastn 9311 176 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
5247976 5247976 PRJNA1000943_P_NODE_6105_length_327_cov_1.228346_g5967_i0 PRJNA1000943 6105 327 1.228346 4.01669142 Liolophura japonica 13599 Mollusca Mollusca 52.8 0.031   NTclustered gi|2724234133|ref|XM_064742165.1| 13599 g5967 i0 100 0.0856269113149847 28 0 9 0 281 308 844 871 PREDICTED: Liolophura japonica lupus La protein homolog (LOC135464675), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
10348346 10348346 PRJNA1000943_P_NODE_8949_length_278_cov_1.521951_g8811_i0 PRJNA1000943 8949 278 1.521951 4.23102378 Ctena cf. galapagana NHMUK 20210086 2892552 Mollusca Mollusca 134 8.88e-27   NTclustered gi|2129023951|gb|OL361786.1| 2892552 g8811 i0 91.667 6.61870503597122 96 8 35 0 180 275 4053 4148 Ctena cf. galapagana NHMUK 20210086 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1840 134 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Lucinida Lucinidae Ctena Ctena cf. galapagana NHMUK 20210086
11623691 11623691 PRJNA1000943_P_NODE_13690_length_246_cov_0.901734_g13552_i0 PRJNA1000943 13690 246 0.901734 2.21826564 Bradybaena similaris 145626 Mollusca Mollusca 60.2 1.33e-4   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g13552 i0 94.737 0.154471544715447 38 2 15 0 117 154 80678925 80678888 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 38 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
11623712 11623712 PRJNA1000943_P_NODE_15630_length_241_cov_2.107143_g15492_i0 PRJNA1000943 15630 241 2.107143 5.07821463 Bradybaena similaris 145626 Mollusca Mollusca 93.5 1.28e-14   NTclustered gi|2912995509|dbj|AP039600.1| 145626 g15492 i0 77.005 27.8174273858921 187 27 76 12 55 237 62549568 62549394 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 19, sequence blastn 6704 93.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20546370 20546370 PRJNA1000943_P_NODE_9537_length_270_cov_1.578680_g9399_i0 PRJNA1000943 9537 270 1.57868 4.262436 Bradybaena similaris 145626 Mollusca Mollusca 60.2 1.48e-4   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g9399 i0 94.737 1.4 38 2 14 0 197 234 19185291 19185254 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 378 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
21821930 21821930 PRJNA1000943_P_NODE_11638_length_251_cov_3.286517_g11500_i0 PRJNA1000943 11638 251 3.286517 8.24915767 Aplysia californica 6500 Mollusca Mollusca 171 6.02e-38   NTclustered gi|325297119|ref|NM_001204640.1| 6500 g11500 i0 88.112 56.7848605577689 143 17 57 0 1 143 1061 1203 Aplysia californica actin (LOC100533345), mRNA blastn 14253 171 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
21821949 21821949 PRJNA1000943_P_NODE_1298_length_663_cov_2.350847_g1167_i0 PRJNA1000943 1298 663 2.350847 15.58611561 Mytilus californianus 6549 Mollusca Mollusca 56.5 0.005   NTclustered gi|2334761577|ref|XM_052209329.1| 6549 g1167 i0 100 0.499245852187029 30 0 5 0 114 143 1009 980 PREDICTED: Mytilus californianus uncharacterized LOC127705057 (LOC127705057), transcript variant X3, mRNA blastn 331 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;