RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1000943" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1000943 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2695378 2695378 PRJNA1000943_P_NODE_5903_length_331_cov_1.891473_g5765_i0 PRJNA1000943 5903 331 1.891473 6.26077563 Vavraia culicis 103449 Fungi Fungi 248 3.7e-61   NTclustered gi|667631888|ref|XM_008075036.1| 948595 g5765 i0 81.457 2.70392749244713 302 56 91 0 16 317 278 579 Vavraia culicis subsp. floridensis actin-1 (VCUG_00207), mRNA blastn 895 248 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
3971508 3971508 PRJNA1000943_P_NODE_8884_length_279_cov_1.184466_g8746_i0 PRJNA1000943 8884 279 1.184466 3.30466014 Pleistophora mulleri 249366 Fungi Fungi 420 6.11e-113   NTclustered gi|134147422|gb|EF119339.1| 249366 g8746 i0 93.594 32.84229390681 281 16 100 2 1 279 3520 3240 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 9163 420 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
6523498 6523498 PRJNA1000943_P_NODE_4366_length_377_cov_2.315789_g4229_i0 PRJNA1000943 4366 377 2.315789 8.73052453 Pleistophora mulleri 249366 Fungi Fungi 250 1.19e-61   NTclustered gi|134147422|gb|EF119339.1| 249366 g4229 i0 83.835 0.705570291777188 266 39 70 3 1 264 2367 2630 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 266 250 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
9072630 9072630 PRJNA1000943_P_NODE_4968_length_357_cov_1.098592_g4831_i0 PRJNA1000943 4968 357 1.098592 3.92197344 Fusasporis stethaprioni 2777717 Fungi Fungi 573 5.829999999999998e-159   NTclustered gi|1914073495|gb|MW077214.1| 2777717 g4831 i0 95.81 99.8515406162465 358 10 100 4 1 357 867 1220 Fusasporis stethaprioni strain 2018 small subunit ribosomal RNA gene, partial sequence blastn 35647 573 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Fusasporis Fusasporis stethaprioni
9927268 9927268 PRJNA1000943_P_NODE_9488_length_270_cov_3.167513_g9350_i0 PRJNA1000943 9488 270 3.167513 8.5522851 Heterosporis 157917 Fungi Fungi 381 2.779999999999999e-101   NTclustered gi|448278452|gb|KC137548.1| 1289055 g9350 i0 92.509 11.7703703703704 267 18 99 2 3 268 1885 2150 Heterosporis sp. NBDP-2013a isolate MN/WAE small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3178 381 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
17577113 17577113 PRJNA1000943_P_NODE_3554_length_413_cov_1.726471_g3417_i0 PRJNA1000943 3554 413 1.726471 7.13032523 Eukaryota 2759 Fungi Fungi 394 5.73e-105   NTclustered gi|16605491|emb|AJ295325.1| 144522 g3417 i0 84.123 101.411622276029 422 52 100 8 1 413 961 1376 Glugea sp. GS1 partial 16S rRNA gene, ITS and partial 23S rRNA gene blastn 41883 396 0.994949494949495 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Glugea Glugea sp. GS1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;