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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA1000943" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA1000943 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
145149 145149 PRJNA1000943_P_NODE_14681_length_244_cov_0.912281_g14543_i0 PRJNA1000943 14681 244 0.912281 2.22596564 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 300 7.12e-77   NTclustered gi|290991034|ref|XM_002678095.1| 5762 g14543 i0 88.934 1.99590163934426 244 25 99 2 2 244 795 553 Naegleria gruberi mitochondrial citrate synthetase (NAEGRDRAFT_38914), mRNA blastn 487 300 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
1419825 1419825 PRJNA1000943_P_NODE_14602_length_244_cov_0.912281_g14464_i0 PRJNA1000943 14602 244 0.912281 2.22596564 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 302 1.98e-77   NTclustered gi|290987211|ref|XM_002676271.1| 5762 g14464 i0 88.934 4.27049180327869 244 27 100 0 1 244 495 252 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_39465), mRNA blastn 1042 302 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2695351 2695351 PRJNA1000943_P_NODE_3503_length_415_cov_1.140351_g3366_i0 PRJNA1000943 3503 415 1.140351 4.73245665 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 355 2.72e-93   NTclustered gi|290984694|ref|XM_002675016.1| 5762 g3366 i0 83.77 87.7469879518072 382 54 90 5 24 398 381 1 Naegleria gruberi histone H3 (NAEGRDRAFT_55833), partial mRNA blastn 36415 355 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2695394 2695394 PRJNA1000943_P_NODE_7583_length_299_cov_1.035398_g7445_i0 PRJNA1000943 7583 299 1.035398 3.09584002 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 309 1.49e-79   NTclustered gi|290980684|ref|XM_002673016.1| 5762 g7445 i0 85.284 43.0702341137124 299 44 100 0 1 299 867 1165 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56300), mRNA blastn 12878 309 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3971467 3971467 PRJNA1000943_P_NODE_5364_length_345_cov_2.481618_g5226_i0 PRJNA1000943 5364 345 2.481618 8.5615821 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 538 2.0599999999999993e-148   NTclustered gi|2515557648|gb|OR045415.1| 234921 g5226 i0 95.28 39.5565217391304 339 16 98 0 1 339 5447 5785 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 13647 538 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
5247860 5247860 PRJNA1000943_P_NODE_11165_length_253_cov_0.866667_g11027_i0 PRJNA1000943 11165 253 0.866667 2.19266751 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 396 9.209999999999997e-106   NTclustered gi|290983673|ref|XM_002674507.1| 5762 g11027 i0 94.862 31.6363636363636 253 13 100 0 1 253 1112 1364 Naegleria gruberi translation elongation factor 2 (NAEGRDRAFT_56254), mRNA blastn 8004 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5247930 5247930 PRJNA1000943_P_NODE_245_length_1306_cov_10.879157_g197_i0 PRJNA1000943 245 1306 10.879157 142.08179042 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 331 1.53e-85   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g197 i0 88.686 14.8162327718224 274 27 29 4 189 459 3195 2923 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19350 331 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
6523472 6523472 PRJNA1000943_P_NODE_226_length_1344_cov_13.891424_g179_i0 PRJNA1000943 226 1344 13.891424 186.70073856 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 717 0   NTclustered gi|2124407923|ref|XM_044688986.1| 51637 g179 i0 77.064 89.3363095238095 1308 261 96 34 25 1311 1 1290 Naegleria lovaniensis uncharacterized protein (C9374_013142), partial mRNA blastn 120068 717 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
7376695 7376695 PRJNA1000943_P_NODE_10046_length_264_cov_1.497382_g9908_i0 PRJNA1000943 10046 264 1.497382 3.95308848 Naegleria 5761 Heterolobosea other_Eukaryota 488 1.5499999999999999e-133   NTclustered gi|2860563234|gb|PQ640077.1| 37103 g9908 i0 100 97.0151515151515 264 0 100 0 1 264 282 19 Naegleria sp. isolate N5 small subunit ribosomal RNA gene, partial sequence blastn 25612 488 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
7797599 7797599 PRJNA1000943_P_NODE_13047_length_248_cov_0.891429_g12909_i0 PRJNA1000943 13047 248 0.891429 2.21074392 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 302 2.02e-77   NTclustered gi|290979697|ref|XM_002672524.1| 5762 g12909 i0 91.818 0.887096774193548 220 12 89 1 3 222 783 996 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_59159), mRNA blastn 220 302 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7797673 7797673 PRJNA1000943_P_NODE_5227_length_349_cov_2.981884_g5090_i0 PRJNA1000943 5227 349 2.981884 10.40677516 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 207 6.65e-49   NTclustered gi|290978297|ref|XM_002671827.1| 5762 g5090 i0 78.07 1.2378223495702 342 66 97 8 12 348 122 459 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_83282), mRNA blastn 432 207 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7797697 7797697 PRJNA1000943_P_NODE_7567_length_299_cov_1.380531_g7429_i0 PRJNA1000943 7567 299 1.380531 4.12778769 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 172 2.05e-38   NTclustered gi|290984575|ref|XM_002674957.1| 5762 g7429 i0 80.995 2.28428093645485 221 38 73 4 70 288 61 279 Naegleria gruberi ras family small GTPase (NAEGRDRAFT_60771), partial mRNA blastn 683 172 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10348301 10348301 PRJNA1000943_P_NODE_5129_length_352_cov_2.125448_g4992_i0 PRJNA1000943 5129 352 2.125448 7.48157696 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 449 1.0099999999999998e-121   NTclustered gi|2124407020|ref|XM_044688070.1| 51637 g4992 i0 90.56 91.5823863636364 339 32 96 0 1 339 732 1070 Naegleria lovaniensis uncharacterized protein (C9374_012317), partial mRNA blastn 32237 449 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
10348339 10348339 PRJNA1000943_P_NODE_8409_length_285_cov_1.471698_g8271_i0 PRJNA1000943 8409 285 1.471698 4.1943393 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 211 4.1e-50   NTclustered gi|2119442609|ref|XM_044704772.1| 5763 g8271 i0 80 55.4070175438597 285 57 100 0 1 285 342 58 Naegleria fowleri uncharacterized protein (FDP41_001663), partial mRNA blastn 15791 211 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
11202520 11202520 PRJNA1000943_P_NODE_2289_length_504_cov_13.886311_g2152_i0 PRJNA1000943 2289 504 13.886311 69.98700744 Naegleria 5761 Heterolobosea other_Eukaryota 139 3.68e-28   NTclustered gi|2031946985|emb|OD958550.1| 5763 g2152 i0 76.491 15.7857142857143 285 49 56 12 1 284 3020 3287 Naegleria fowleri Karachi_NF001 strain blastn 7956 139 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
11623796 11623796 PRJNA1000943_P_NODE_9390_length_272_cov_1.175879_g9252_i0 PRJNA1000943 9390 272 1.175879 3.19839088 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 182 3.05e-41   NTclustered gi|2119448862|ref|XM_044697922.1| 51637 g9252 i0 79.104 12.6323529411765 268 53 99 2 5 272 604 868 Naegleria lovaniensis uncharacterized protein (C9374_007905), partial mRNA blastn 3436 182 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
14173793 14173793 PRJNA1000943_P_NODE_5712_length_336_cov_1.155894_g5574_i0 PRJNA1000943 5712 336 1.155894 3.88380384 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 182 3.87e-41   NTclustered gi|2031949291|emb|OD958850.1| 5763 g5574 i0 78.495 4.23809523809524 279 58 83 2 1 278 7840 7563 Naegleria fowleri Karachi_NF001 strain blastn 1424 182 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
16722008 16722008 PRJNA1000943_P_NODE_234_length_1327_cov_12.825359_g187_i0 PRJNA1000943 234 1327 12.825359 170.19251393 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 1736 0   NTclustered gi|1059971677|gb|KT892699.1| 1892890 g187 i0 91.939 65.8831951770912 1253 81 94 15 79 1327 1856 620 Heterolobosea sp. strain LPG3 18S ribosomal RNA gene, partial sequence blastn 87427 1736 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.
16722092 16722092 PRJNA1000943_P_NODE_9654_length_268_cov_1.917949_g9516_i0 PRJNA1000943 9654 268 1.917949 5.14010332 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 187 6.449999999999998e-43   NTclustered gi|290998600|ref|XM_002681823.1| 5762 g9516 i0 84.574 2.0634328358209 188 29 70 0 24 211 1042 1229 Naegleria gruberi Glu/Leu/Phe/Val dehydrogenase (NAEGRDRAFT_37816), mRNA blastn 553 187 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17996811 17996811 PRJNA1000943_P_NODE_13975_length_245_cov_1.790698_g13837_i0 PRJNA1000943 13975 245 1.790698 4.3872101 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 425 1.1299999999999999e-114   NTclustered gi|290987207|ref|XM_002676269.1| 5762 g13837 i0 97.959 3.97551020408163 245 5 100 0 1 245 270 26 Naegleria gruberi S25 ribosomal protein (NAEGRDRAFT_80070), mRNA blastn 974 425 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17996916 17996916 PRJNA1000943_P_NODE_9655_length_268_cov_1.917949_g9517_i0 PRJNA1000943 9655 268 1.917949 5.14010332 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 270 6.2199999999999985e-68   NTclustered gi|2031939958|emb|OD957659.1| 5763 g9517 i0 85.659 101.470149253731 258 35 96 2 1 257 8896 8640 Naegleria fowleri Karachi_NF001 strain blastn 27194 270 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
19270651 19270651 PRJNA1000943_P_NODE_12216_length_250_cov_0.881356_g12078_i0 PRJNA1000943 12216 250 0.881356 2.20339 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 411 3.239999999999999e-110   NTclustered gi|290987577|ref|XM_002676453.1| 5762 g12078 i0 96.4 1 250 8 100 1 1 250 455 207 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_58176), mRNA blastn 250 411 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19270658 19270658 PRJNA1000943_P_NODE_12716_length_249_cov_0.886364_g12578_i0 PRJNA1000943 12716 249 0.886364 2.20704636 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 326 1.2e-84   NTclustered gi|290997839|ref|XM_002681443.1| 5762 g12578 i0 90.323 0.995983935742972 248 24 99 0 2 249 393 146 Naegleria gruberi glutaryl-coenzyme A dehydrogenase (NAEGRDRAFT_82969), mRNA blastn 248 326 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19270697 19270697 PRJNA1000943_P_NODE_176_length_1449_cov_2.882994_g140_i0 PRJNA1000943 176 1449 2.882994 41.77458306 Sawyeria marylandensis 194530 Heterolobosea other_Eukaryota 658 0   NTclustered gi|156778104|gb|EF612755.1| 194530 g140 i0 77.358 47.783988957902 1166 229 79 32 305 1449 1659 508 Sawyeria marylandensis heat shock protein 70 mRNA, partial cds blastn 69239 658 1 Eukaryota Discoba   Heterolobosea     Psalteriomonadidae Sawyeria Sawyeria marylandensis
19270774 19270774 PRJNA1000943_P_NODE_8216_length_288_cov_1.511628_g8078_i0 PRJNA1000943 8216 288 1.511628 4.35348864 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 217 8.93e-52   NTclustered gi|290983663|ref|XM_002674502.1| 5762 g8078 i0 82.54 69.0173611111111 252 38 86 6 15 263 105 353 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80585), mRNA blastn 19877 217 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20546251 20546251 PRJNA1000943_P_NODE_1317_length_657_cov_15.178082_g1186_i0 PRJNA1000943 1317 657 15.178082 99.71999874 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 941 0   NTclustered gi|1059971677|gb|KT892699.1| 1892890 g1186 i0 93.78 31.7884322678843 627 38 95 1 1 627 626 1 Heterolobosea sp. strain LPG3 18S ribosomal RNA gene, partial sequence blastn 20885 941 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.
20546357 20546357 PRJNA1000943_P_NODE_8557_length_283_cov_1.476190_g8419_i0 PRJNA1000943 8557 283 1.47619 4.1776177 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 246 1.1199999999999999e-60   NTclustered gi|2119441523|ref|XM_044695287.1| 51637 g8419 i0 84.231 9.82332155477032 260 34 90 6 18 272 1096 1353 Naegleria lovaniensis uncharacterized protein (C9374_005527), partial mRNA blastn 2780 246 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
21821928 21821928 PRJNA1000943_P_NODE_11538_length_252_cov_0.871508_g11400_i0 PRJNA1000943 11538 252 0.871508 2.19620016 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 361 3.34e-95   NTclustered gi|290977528|ref|XM_002671444.1| 5762 g11400 i0 92.46 1 252 19 100 0 1 252 260 9 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_81508), mRNA blastn 252 361 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21821999 21821999 PRJNA1000943_P_NODE_358_length_1131_cov_18.262760_g293_i0 PRJNA1000943 358 1131 18.26276 206.5518156 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 976 0   NTclustered gi|290977237|ref|XM_002671299.1| 5762 g293 i0 82.411 92.7082228116711 1120 195 99 2 12 1130 28 1146 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56335), mRNA blastn 104853 976 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25225377 25225377 PRJNA1000943_P_NODE_6400_length_321_cov_1.153226_g6262_i0 PRJNA1000943 6400 321 1.153226 3.70185546 Naegleria 5761 Heterolobosea other_Eukaryota 549 8.759999999999997e-152   NTclustered gi|2618963742|gb|OR769034.1| 5762 g6262 i0 97.508 25.3769470404984 321 8 100 0 1 321 4080 3760 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 8146 549 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;