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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA1000943" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA1000943 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
999277 999277 PRJNA1000943_P_NODE_8321_length_286_cov_2.863850_g8183_i0 PRJNA1000943 8321 286 2.86385 8.190611 Acanthamoeba 5754 Discosea other_Eukaryota 119 2.57e-22   NTclustered gi|155620|gb|M93361.1|ACAACTPH 5755 g8183 i0 83.594 0.895104895104895 128 19 44 2 22 148 391 265 Acanthamoeba castellanii actophorin mRNA, complete cds blastn 256 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1419783 1419783 PRJNA1000943_P_NODE_10782_length_255_cov_2.247253_g10644_i0 PRJNA1000943 10782 255 2.247253 5.73049515 Ripella tribonemae 2047823 Discosea other_Eukaryota 156 1.72e-33   NTclustered gi|1269228457|gb|MF683582.1| 2047823 g10644 i0 87.591 50.9333333333333 137 13 53 4 68 201 1364 1229 Ripella tribonemae clone 70.1.17 18S ribosomal RNA gene, partial sequence blastn 12988 156 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
3971429 3971429 PRJNA1000943_P_NODE_15944_length_229_cov_2.397436_g15806_i0 PRJNA1000943 15944 229 2.397436 5.49012844 Cochliopodium minus 313997 Discosea other_Eukaryota 287 5.14e-73   NTclustered gi|330902862|gb|JF298257.1| 313997 g15806 i0 88.983 47.5152838427948 236 17 100 9 1 229 1177 1410 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 10881 287 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
3971447 3971447 PRJNA1000943_P_NODE_2984_length_447_cov_4.558824_g2847_i0 PRJNA1000943 2984 447 4.558824 20.37794328 Ripella sp. 805 1217113 Discosea other_Eukaryota 715 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g2847 i0 95.759 101.485458612975 448 11 100 6 1 447 987 547 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 45364 715 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
6523543 6523543 PRJNA1000943_P_NODE_8346_length_286_cov_1.464789_g8208_i0 PRJNA1000943 8346 286 1.464789 4.18929654 Ripella tribonemae 2047823 Discosea other_Eukaryota 204 6.899999999999999e-48   NTclustered gi|1269228466|gb|MF683591.1| 2047823 g8208 i0 84.615 66.2342657342657 208 28 73 4 69 276 892 689 Ripella tribonemae clone 22.1.8 18S ribosomal RNA gene, partial sequence blastn 18943 204 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
7376724 7376724 PRJNA1000943_P_NODE_1646_length_591_cov_1.959459_g1510_i0 PRJNA1000943 1646 591 1.959459 11.58040269 Vannellidae 95227 Discosea other_Eukaryota 928 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g1510 i0 95.118 100.639593908629 594 20 100 8 1 591 1094 1681 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 59478 929 0.998923573735199 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
9072640 9072640 PRJNA1000943_P_NODE_6108_length_327_cov_1.200787_g5970_i0 PRJNA1000943 6108 327 1.200787 3.92657349 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 344 4.53e-90   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g5970 i0 85.671 42.2782874617737 328 45 100 2 1 327 1592 1266 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 13825 344 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11623685 11623685 PRJNA1000943_P_NODE_13490_length_247_cov_0.896552_g13352_i0 PRJNA1000943 13490 247 0.896552 2.21448344 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 58.4 4.8e-4   NTclustered gi|470492282|ref|XM_004345943.1| 1257118 g13352 i0 100 0.238866396761134 31 0 13 0 151 181 691 721 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_183950), partial mRNA blastn 59 58.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11623766 11623766 PRJNA1000943_P_NODE_6490_length_319_cov_1.130081_g6352_i0 PRJNA1000943 6490 319 1.130081 3.60495839 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 95.3 4.9e-15   NTclustered gi|470384599|ref|XM_004334016.1| 1257118 g6352 i0 86.905 0.382445141065831 84 11 26 0 4 87 720 803 Acanthamoeba castellanii str. Neff Fibrillarin, putative (ACA1_025690), partial mRNA blastn 122 95.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13752712 13752712 PRJNA1000943_P_NODE_1911_length_548_cov_4.235789_g1775_i0 PRJNA1000943 1911 548 4.235789 23.21212372 Ripella 1217112 Discosea other_Eukaryota 870 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g1775 i0 95.764 99.8065693430657 543 18 99 5 9 548 1 541 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 54694 870 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
15447824 15447824 PRJNA1000943_P_NODE_1513_length_619_cov_2.115385_g1378_i0 PRJNA1000943 1513 619 2.115385 13.09423315 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 420 1.4599999999999998e-112   NTclustered gi|470437282|ref|XM_004338924.1| 1257118 g1378 i0 80 91.4168012924071 585 103 93 13 6 583 620 43 Acanthamoeba castellanii str. Neff adenine nucleotide translocator, putative (ACA1_128450), partial mRNA blastn 56587 420 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19270734 19270734 PRJNA1000943_P_NODE_5016_length_355_cov_2.812057_g4879_i0 PRJNA1000943 5016 355 2.812057 9.98280235 Cochliopodium minus 313997 Discosea other_Eukaryota 486 7.77e-133   NTclustered gi|330902862|gb|JF298257.1| 313997 g4879 i0 99.624 59.8028169014084 266 1 75 0 29 294 252 517 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 21230 486 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
21821976 21821976 PRJNA1000943_P_NODE_15638_length_240_cov_6.958084_g15500_i0 PRJNA1000943 15638 240 6.958084 16.6994016 Cochliopodium minus 313997 Discosea other_Eukaryota 333 6.88e-87   NTclustered gi|330902862|gb|JF298257.1| 313997 g15500 i0 94.495 10.1916666666667 218 8 90 4 3 219 218 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 2446 333 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;