RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1000943" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA1000943 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3971474 3971474 PRJNA1000943_P_NODE_6044_length_328_cov_1.737255_g5906_i0 PRJNA1000943 6044 328 1.737255 5.6981964 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.031   NTclustered gi|2795625292|ref|XM_068066676.1| 483139 g5906 i0 100 0.0853658536585366 28 0 9 0 10 37 3773 3800 Cystoisospora suis uncharacterized protein (CSUI_006520), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
7376700 7376700 PRJNA1000943_P_NODE_1046_length_731_cov_5.129179_g920_i0 PRJNA1000943 1046 731 5.129179 37.49429849 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 263 3.11e-65   NTclustered gi|2785765936|ref|XM_067218065.1| 5824 g920 i0 87.391 52.4254445964432 230 27 31 2 478 706 457 229 Plasmodium brasilianum polyubiquitin (MKS88_004855), partial mRNA blastn 38323 263 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
7376708 7376708 PRJNA1000943_P_NODE_12386_length_249_cov_3.886364_g12248_i0 PRJNA1000943 12386 249 3.886364 9.67704636 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 102 2.21e-17   NTclustered gi|1270522957|ref|XM_022957044.1| 5861 g12248 i0 80 2.42570281124498 140 27 56 1 75 214 225 87 Plasmodium yoelii 40S ribosomal protein S5, putative (PY17X_1314600), partial mRNA blastn 604 102 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
7797687 7797687 PRJNA1000943_P_NODE_6727_length_313_cov_3.575000_g6589_i0 PRJNA1000943 6727 313 3.575 11.18975 Hepatozoon canis 110120 SAR_Eukaryotes SAR_Eukaryotes 191 5.95e-44   NTclustered gi|1584069862|gb|MH615006.1| 110120 g6589 i0 89.474 50.0607028753994 152 14 49 1 17 168 4460 4311 Hepatozoon canis isolate 9992 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 15669 191 1 Eukaryota Sar   Apicomplexa     Hepatozoidae Hepatozoon Hepatozoon canis
11202524 11202524 PRJNA1000943_P_NODE_3169_length_434_cov_7.570637_g3032_i0 PRJNA1000943 3169 434 7.570637 32.85656458 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 388 2.8099999999999997e-103   NTclustered gi|559806|gb|U15994.1|PFU15994 5833 g3032 i0 83.411 50.9354838709677 428 61 98 6 7 432 557 138 Plasmodium falciparum histone H3 mRNA, complete cds blastn 22106 388 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
11202533 11202533 PRJNA1000943_P_NODE_4349_length_378_cov_1.311475_g4212_i0 PRJNA1000943 4349 378 1.311475 4.9573755 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 165 4.43e-36   NTclustered gi|396582138|gb|JN696678.1| 5874 g4212 i0 89.844 34.3095238095238 128 13 34 0 167 294 1262 1135 Theileria annulata 28S ribosomal RNA gene, partial sequence blastn 12969 165 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
15447805 15447805 PRJNA1000943_P_NODE_13393_length_247_cov_0.896552_g13255_i0 PRJNA1000943 13393 247 0.896552 2.21448344 Babesia bigemina 5866 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.33e-4   NTclustered gi|833487557|ref|XM_012912780.1| 5866 g13255 i0 88.235 12.5425101214575 51 4 20 2 190 239 492 541 Babesia bigemina hypothetical protein partial mRNA blastn 3098 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
16301803 16301803 PRJNA1000943_P_NODE_1493_length_623_cov_1.796364_g1359_i0 PRJNA1000943 1493 623 1.796364 11.19134772 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 363 2.51e-95   NTclustered gi|1624461309|ref|XM_029004036.1| 5858 g1359 i0 77.832 59.529695024077 618 116 98 18 12 623 1590 988 Plasmodium malariae heat shock protein 70, putative (PmUG01_07029400), partial mRNA blastn 37087 366 0.991803278688525 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
17996783 17996783 PRJNA1000943_P_NODE_10155_length_263_cov_1.368421_g10017_i0 PRJNA1000943 10155 263 1.368421 3.59894723 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 207 4.84e-49   NTclustered gi|2794756692|ref|XM_067945866.1| 323732 g10017 i0 81.226 73.5513307984791 261 45 98 4 5 263 879 621 Babesia duncani bifunctional Actin-actin-like conserved site/Actin family/ATPase (BdWA1_000818), partial mRNA blastn 19344 207 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
20546235 20546235 PRJNA1000943_P_NODE_11717_length_251_cov_1.292135_g11579_i0 PRJNA1000943 11717 251 1.292135 3.24325885 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|916420781|ref|XM_013376168.1| 5802 g11579 i0 100 0.111553784860558 28 0 11 0 164 191 842 815 Eimeria tenella uncharacterized protein (ETH_00006165), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
21821986 21821986 PRJNA1000943_P_NODE_2258_length_508_cov_2.050575_g2121_i0 PRJNA1000943 2258 508 2.050575 10.416921 Plasmodium gonderi 77519 SAR_Eukaryotes SAR_Eukaryotes 329 2.05e-85   NTclustered gi|1620949653|ref|XM_028686889.1| 77519 g2121 i0 78.516 70.1811023622047 512 102 100 8 1 508 1231 724 Plasmodium gonderi tubulin alpha chain (PGO_070160), partial mRNA blastn 35652 329 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gonderi
25225358 25225358 PRJNA1000943_P_NODE_2360_length_496_cov_3.574468_g2223_i0 PRJNA1000943 2360 496 3.574468 17.72936128 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 244 7.45e-60   NTclustered gi|160318|gb|M86865.1|PFAH2AA 5833 g2223 i0 82.796 10.7318548387097 279 42 56 6 86 361 360 85 Plasmodium falciparum histone 2A (H2A) mRNA, complete cds blastn 5323 244 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;