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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA1000943" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 21 ✖

bioproject 1

  • PRJNA1000943 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
145097 145097 PRJNA1000943_P_NODE_10161_length_263_cov_1.247368_g10023_i0 PRJNA1000943 10161 263 1.247368 3.28057784 Sobemovirus SYCMV 3432513 Viruses Viruses 470 5.59e-128   NTclustered gi|2737472539|dbj|LC818002.1| 1080798 g10023 i0 98.859 23.5703422053232 263 3 100 0 1 263 351 89 Soybean yellow common mosaic virus SYCMV_SE_CNU1 SYCMV_gp1, SYCMV_gp3, SYCMV_gp2, SYCMV_gp4 genes for putative movement protein, polyprotein P2ab, polyprotein P2a, capsid protein, complete and partial cds blastn 6199 470 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus SYCMV
1419858 1419858 PRJNA1000943_P_NODE_2842_length_456_cov_1.838120_g2705_i0 PRJNA1000943 2842 456 1.83812 8.3818272 Sobemovirus SYCMV 3432513 Viruses Viruses 760 0   NTclustered gi|2737472539|dbj|LC818002.1| 1080798 g2705 i0 96.711 33.4276315789474 456 15 100 0 1 456 1606 1151 Soybean yellow common mosaic virus SYCMV_SE_CNU1 SYCMV_gp1, SYCMV_gp3, SYCMV_gp2, SYCMV_gp4 genes for putative movement protein, polyprotein P2ab, polyprotein P2a, capsid protein, complete and partial cds blastn 15243 760 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus SYCMV
2695287 2695287 PRJNA1000943_P_NODE_11703_length_251_cov_1.398876_g11565_i0 PRJNA1000943 11703 251 1.398876 3.51117876 Sobemovirus SYCMV 3432513 Viruses Viruses 453 5.34e-123   NTclustered gi|2737472539|dbj|LC818002.1| 1080798 g11565 i0 99.203 31.4382470119522 251 2 100 0 1 251 3326 3576 Soybean yellow common mosaic virus SYCMV_SE_CNU1 SYCMV_gp1, SYCMV_gp3, SYCMV_gp2, SYCMV_gp4 genes for putative movement protein, polyprotein P2ab, polyprotein P2a, capsid protein, complete and partial cds blastn 7891 453 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus SYCMV
3971375 3971375 PRJNA1000943_P_NODE_1184_length_691_cov_2.631068_g1054_i0 PRJNA1000943 1184 691 2.631068 18.18067988 Aparavirus israelense 3048155 Viruses Viruses 1243 0   NTclustered gi|2671680470|gb|OR496452.1| 294365 g1054 i0 99.273 91.7149059334298 688 5 99 0 4 691 7056 6369 MAG: Israeli acute paralysis virus isolate Andong genomic sequence blastn 63375 1243 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
3971436 3971436 PRJNA1000943_P_NODE_2204_length_513_cov_2.772727_g2067_i0 PRJNA1000943 2204 513 2.772727 14.22408951 Aparavirus israelense 3048155 Viruses Viruses 887 0   NTclustered gi|2671680486|gb|OR496456.1| 294365 g2067 i0 97.856 54 513 11 100 0 1 513 4150 3638 MAG: Israeli acute paralysis virus isolate Gyeongju genomic sequence blastn 27702 887 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
7797595 7797595 PRJNA1000943_P_NODE_1267_length_670_cov_3.311558_g1136_i0 PRJNA1000943 1267 670 3.311558 22.1874386 Aparavirus israelense 3048155 Viruses Viruses 1175 0   NTclustered gi|2671680494|gb|OR496458.1| 294365 g1136 i0 98.358 90.5716417910448 670 10 99 1 2 670 887 218 MAG: Israeli acute paralysis virus isolate Uiseong genomic sequence blastn 60683 1175 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
7797644 7797644 PRJNA1000943_P_NODE_2147_length_518_cov_4.256180_g2010_i0 PRJNA1000943 2147 518 4.25618 22.0470124 Aparavirus israelense 3048155 Viruses Viruses 891 0   NTclustered gi|2671680486|gb|OR496456.1| 294365 g2010 i0 97.683 53.9382239382239 518 12 100 0 1 518 3114 3631 MAG: Israeli acute paralysis virus isolate Gyeongju genomic sequence blastn 27940 891 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
10348226 10348226 PRJNA1000943_P_NODE_13849_length_246_cov_0.901734_g13711_i0 PRJNA1000943 13849 246 0.901734 2.21826564 Sopapen virus 3131614 Viruses Viruses 139 1.66e-28   NTclustered gi|2717322942|gb|PP173915.1| 3131614 g13711 i0 93.548 9.98373983739837 93 6 38 0 22 114 527 435 MAG: Sopapen virus isolate SP1A_k141_131186 genomic sequence blastn 2456 139 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sopapen virus
10348275 10348275 PRJNA1000943_P_NODE_2809_length_458_cov_2.129870_g2672_i0 PRJNA1000943 2809 458 2.12987 9.7548046 Aparavirus israelense 3048155 Viruses Viruses 813 0   NTclustered gi|2127009797|gb|MZ821845.1| 294365 g2672 i0 98.69 79.9606986899563 458 6 100 0 1 458 2949 2492 MAG: Israeli acute paralysis virus isolate IAPV_No6_Mi020-JL2018-10 replicase polyprotein and capsid protein genes, complete cds blastn 36622 813 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
10348305 10348305 PRJNA1000943_P_NODE_5469_length_342_cov_2.029740_g5331_i0 PRJNA1000943 5469 342 2.02974 6.9417108 Sobemovirus SYCMV 3432513 Viruses Viruses 577 4.31e-160   NTclustered gi|2737472559|dbj|LC818006.1| 1080798 g5331 i0 97.076 18.4736842105263 342 10 100 0 1 342 2538 2197 Soybean yellow common mosaic virus SYCMV_NA_CNU1 SYCMV_gp1, SYCMV_gp3, SYCMV_gp2, SYCMV_gp4 genes for putative movement protein, polyprotein P2ab, polyprotein P2a, capsid protein, complete cds blastn 6318 577 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus SYCMV
14173684 14173684 PRJNA1000943_P_NODE_1012_length_741_cov_2.320359_g886_i0 PRJNA1000943 1012 741 2.320359 17.19386019 Aparavirus israelense 3048155 Viruses Viruses 1308 0   NTclustered gi|2514754451|gb|OP972882.1| 294365 g886 i0 98.516 71.195681511471 741 11 100 0 1 741 8156 7416 MAG: Israeli acute paralysis virus isolate Hwasun_B, complete genome blastn 52756 1308 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
14173755 14173755 PRJNA1000943_P_NODE_1932_length_546_cov_2.391121_g1796_i0 PRJNA1000943 1932 546 2.391121 13.055520660000001 Aparavirus israelense 3048155 Viruses Viruses 992 0   NTclustered gi|2127009794|gb|MZ821844.1| 294365 g1796 i0 99.451 53.5586080586081 546 3 100 0 1 546 1028 1573 MAG: Israeli acute paralysis virus isolate IAPV_No5_Mi002-AH2018 replicase polyprotein and capsid protein genes, complete cds blastn 29243 992 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
14173759 14173759 PRJNA1000943_P_NODE_2492_length_484_cov_2.440389_g2355_i0 PRJNA1000943 2492 484 2.440389 11.81148276 Aparavirus israelense 3048155 Viruses Viruses 872 0   NTclustered gi|2514754445|gb|OP972880.1| 294365 g2355 i0 99.174 65.1074380165289 484 4 100 0 1 484 8923 8440 MAG: Israeli acute paralysis virus isolate Geochang_A genomic sequence blastn 31512 872 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
14173775 14173775 PRJNA1000943_P_NODE_412_length_1076_cov_2.985045_g339_i0 PRJNA1000943 412 1076 2.985045 32.1190842 Aparavirus israelense 3048155 Viruses Viruses 1905 0   NTclustered gi|2671680470|gb|OR496452.1| 294365 g339 i0 98.695 71.8996282527881 1073 14 99 0 4 1076 5523 4451 MAG: Israeli acute paralysis virus isolate Andong genomic sequence blastn 77364 1905 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
15447909 15447909 PRJNA1000943_P_NODE_7613_length_298_cov_1.733333_g7475_i0 PRJNA1000943 7613 298 1.733333 5.16533234 Sobemovirus SYCMV 3432513 Viruses Viruses 507 4.92e-139   NTclustered gi|2737472559|dbj|LC818006.1| 1080798 g7475 i0 97.315 15.8489932885906 298 8 100 0 1 298 800 1097 Soybean yellow common mosaic virus SYCMV_NA_CNU1 SYCMV_gp1, SYCMV_gp3, SYCMV_gp2, SYCMV_gp4 genes for putative movement protein, polyprotein P2ab, polyprotein P2a, capsid protein, complete cds blastn 4723 507 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus SYCMV
16721998 16721998 PRJNA1000943_P_NODE_1594_length_601_cov_1.791667_g1459_i0 PRJNA1000943 1594 601 1.791667 10.76791867 Aparavirus israelense 3048155 Viruses Viruses 1038 0   NTclustered gi|491846189|gb|KC690270.1| 294365 g1459 i0 97.841 66.2745424292845 602 12 100 1 1 601 1713 2314 Israeli acute paralysis virus strain Korea3, complete genome blastn 39831 1038 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
16722091 16722091 PRJNA1000943_P_NODE_9574_length_269_cov_2.556122_g9436_i0 PRJNA1000943 9574 269 2.556122 6.87596818 Sobemovirus SYCMV 3432513 Viruses Viruses 492 1.23e-134   NTclustered gi|2056529904|gb|MT997092.1| 1080798 g9436 i0 99.628 43.2862453531598 269 1 100 0 1 269 1889 1621 Soybean yellow common mosaic virus isolate CHN-JZ-02, partial genome blastn 11644 492 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus SYCMV
17996882 17996882 PRJNA1000943_P_NODE_635_length_902_cov_12.401689_g534_i0 PRJNA1000943 635 902 12.401689 111.86323478 Betacoronavirus pandemicum 3418604 Viruses Viruses 1666 0   NTclustered gi|1836048744|gb|MT415897.1| 2697049 g534 i0 100 100 902 0 100 0 1 902 29176 28275 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/VA-DCLS-0072/2020, complete genome blastn 90200 1666 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
20546346 20546346 PRJNA1000943_P_NODE_7537_length_299_cov_2.190265_g7399_i0 PRJNA1000943 7537 299 2.190265 6.54889235 Aparavirus israelense 3048155 Viruses Viruses 516 8.2e-142   NTclustered gi|2574590679|gb|OR416402.1| 294365 g7399 i0 97.674 65.5852842809364 301 5 100 1 1 299 5259 5559 MAG: Israeli acute paralysis virus isolate IAPV-Vcra nonstructural polyprotein gene, complete cds blastn 19610 516 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus israelense
23097335 23097335 PRJNA1000943_P_NODE_5339_length_346_cov_2.274725_g5201_i0 PRJNA1000943 5339 346 2.274725 7.8705485 Sobemovirus SYCMV 3432513 Viruses Viruses 614 3.329999999999999e-171   NTclustered gi|2737472539|dbj|LC818002.1| 1080798 g5201 i0 98.837 22.150289017341 344 4 99 0 3 346 671 328 Soybean yellow common mosaic virus SYCMV_SE_CNU1 SYCMV_gp1, SYCMV_gp3, SYCMV_gp2, SYCMV_gp4 genes for putative movement protein, polyprotein P2ab, polyprotein P2a, capsid protein, complete and partial cds blastn 7664 614 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus SYCMV
23097350 23097350 PRJNA1000943_P_NODE_6219_length_324_cov_2.486056_g6081_i0 PRJNA1000943 6219 324 2.486056 8.05482144 Sobemovirus SYCMV 3432513 Viruses Viruses 571 1.8899999999999993e-158   NTclustered gi|2737472539|dbj|LC818002.1| 1080798 g6081 i0 98.457 20.7654320987654 324 5 100 0 1 324 2856 3179 Soybean yellow common mosaic virus SYCMV_SE_CNU1 SYCMV_gp1, SYCMV_gp3, SYCMV_gp2, SYCMV_gp4 genes for putative movement protein, polyprotein P2ab, polyprotein P2a, capsid protein, complete and partial cds blastn 6728 571 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus SYCMV

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;