RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB9859" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB9859 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
999010 999010 PRJEB9859_P_NODE_2141_length_313_cov_3932.598592_g2106_i0 PRJEB9859 2141 313 3932.598592 12309.03359296 Fungi 4751 Fungi Fungi 494 4.05e-135   NTclustered gi|1772639889|gb|MN644615.1| 64495 g2106 i0 96.949 93.1980830670927 295 7 94 2 1 294 512 805 Rhizopus arrhizus voucher research collection Farrer lab 262 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29171 494 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
1419701 1419701 PRJEB9859_P_NODE_902_length_404_cov_1.664000_g868_i0 PRJEB9859 902 404 1.664 6.72256 Halteromyces radiatus 101107 Fungi Fungi 259 2.13e-64   NTclustered gi|2323705723|ref|XM_051543322.1| 101107 g868 i0 82.877 61.3292079207921 292 46 72 4 104 393 650 361 Halteromyces radiatus 40S ribosomal protein S5 (BX664DRAFT_321606), mRNA blastn 24777 259 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
8652164 8652164 PRJEB9859_P_NODE_3967_length_255_cov_7.274336_g3932_i0 PRJEB9859 3967 255 7.274336 18.5495568 Opisthokonta 33154 Fungi Fungi 148 2.8699999999999997e-31   NTclustered gi|2323737195|ref|XM_051542250.1| 101107 g3932 i0 92.308 48.1725490196078 104 8 41 0 1 104 1302 1405 Halteromyces radiatus tubulin alpha-1 chain (BX664DRAFT_297678), mRNA blastn 12284 148 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;