RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB9859" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB9859 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1419682 1419682 PRJEB9859_P_NODE_6122_length_232_cov_238.177340_g6087_i0 PRJEB9859 6122 232 238.17734 552.5714288 Sphaeromyxa zaharoni 275449 Cnidaria other_Eukaryota 60.2 1.24e-4   NTclustered gi|2663986569|emb|OY751524.1| 275449 g6087 i0 100 2.87068965517241 32 0 14 0 175 206 6365 6334 Sphaeromyxa zaharoni isolate 24.2.2011 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 666 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sphaeromyxidae Sphaeromyxa Sphaeromyxa zaharoni
7797498 7797498 PRJEB9859_P_NODE_887_length_405_cov_9.635638_g853_i0 PRJEB9859 887 405 9.635638 39.0243339 Acropora millepora 45264 Cnidaria other_Eukaryota 52.8 0.039   NTclustered gi|2114135399|ref|XM_029355121.2| 45264 g853 i0 100 0.207407407407407 28 0 7 0 319 346 605 578 PREDICTED: Acropora millepora uncharacterized LOC114974984 (LOC114974984), mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
20125559 20125559 PRJEB9859_P_NODE_516_length_471_cov_6.314480_g490_i0 PRJEB9859 516 471 6.31448 29.7412008 Metazoa 33208 Cnidaria other_Eukaryota 65.8 5.88e-6   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g490 i0 97.368 2.76220806794055 38 1 8 0 116 153 9307223 9307260 Anemonia sulcata genome assembly, chromosome: 9 blastn 1301 65.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
21821811 21821811 PRJEB9859_P_NODE_5658_length_241_cov_13018.099057_g5623_i0 PRJEB9859 5658 241 13018.099057 31373.61872737 Acropora digitifera 70779 Cnidaria other_Eukaryota 69.4 2.15e-7   NTclustered gi|1005425981|ref|XR_001560995.1| 70779 g5623 i0 97.5 16.4107883817427 40 1 17 0 173 212 59 20 PREDICTED: Acropora digitifera uncharacterized LOC107329384 (LOC107329384), transcript variant X8, ncRNA blastn 3955 69.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;