RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB9859" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB9859 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3971275 3971275 PRJEB9859_P_NODE_7544_length_212_cov_3.939891_g7509_i0 PRJEB9859 7544 212 3.939891 8.35256892 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 119 1.81e-22   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g7509 i0 93.75 1.44339622641509 80 4 37 1 67 145 116 37 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 306 119 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
10347986 10347986 PRJEB9859_P_NODE_2109_length_315_cov_1.489510_g2074_i0 PRJEB9859 2109 315 1.48951 4.6919565 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 206 2.1399999999999994e-48   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g2074 i0 81.154 1.59365079365079 260 46 82 3 34 291 859739 859481 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 502 206 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;