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contig_metadata

26 rows where analysis = "blastn", bioproject = "PRJEB9859" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 26 ✖

bioproject 1

  • PRJEB9859 · 26 ✖

analysis 1

  • blastn · 26 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3971189 3971189 PRJEB9859_P_NODE_2064_length_316_cov_4279.383275_g2029_i0 PRJEB9859 2064 316 4279.383275 13522.851149 Betacoronavirus pandemicum 3418604 Viruses Viruses 82.4 3.77e-11   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g2029 i0 92.982 11.4841772151899 57 2 17 2 232 286 29964 29908 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3629 82.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5247728 5247728 PRJEB9859_P_NODE_4945_length_245_cov_13167.888889_g4910_i0 PRJEB9859 4945 245 13167.888889 32261.32777805 Respirovirus laryngotracheitidis 3049952 Viruses Viruses 67.6 7.9e-7   NTclustered gi|1832329193|gb|MT232426.1| 12730 g4910 i0 97.436 15.4081632653061 39 1 16 0 173 211 3 41 MAG: Human respirovirus 1 isolate 2019AZ, complete genome blastn 3775 67.6 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Respirovirus Respirovirus laryngotracheitidis
5247777 5247777 PRJEB9859_P_NODE_85_length_811_cov_37.657289_g79_i0 PRJEB9859 85 811 37.657289 305.40061379 Nilaparvata lugens C virus 1577072 Viruses Viruses 122 6.12e-23   NTclustered gi|726973360|gb|KM270560.1| 1577072 g79 i0 86.207 2.1035758323058 116 12 14 3 698 809 9048 9163 Nilaparvata lugens C virus, complete genome blastn 1706 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Nilaparvata lugens C virus
6523231 6523231 PRJEB9859_P_NODE_2086_length_315_cov_4209.076923_g2051_i0 PRJEB9859 2086 315 4209.076923 13258.59230745 Betacoronavirus pandemicum 3418604 Viruses Viruses 82.4 3.76e-11   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g2051 i0 96.078 11.7904761904762 51 1 16 1 232 281 29964 29914 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3714 82.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
7797440 7797440 PRJEB9859_P_NODE_4047_length_254_cov_1.217778_g4012_i0 PRJEB9859 4047 254 1.217778 3.09315612 Betacystovirus phi12 3427160 Viruses Viruses 233 7.669999999999999e-57   NTclustered gi|22855221|ref|NC_004175.1| 161736 g4012 i0 98.485 0.519685039370079 132 2 52 0 123 254 600 469 Pseudomonas phage phi12 segment M, complete sequence blastn 132 233 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
8652165 8652165 PRJEB9859_P_NODE_4107_length_252_cov_12471.201794_g4072_i0 PRJEB9859 4107 252 12471.201794 31427.42852088 Viruses 10239 Viruses Viruses 67.6 8.16e-7   NTclustered gi|2557634435|emb|OY691424.1| 2697049 g4072 i0 100 15.9166666666667 36 0 14 0 45 80 7555 7590 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4011 67.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8652173 8652173 PRJEB9859_P_NODE_5827_length_240_cov_13491.246445_g5792_i0 PRJEB9859 5827 240 13491.246445 32378.991468 Viruses 10239 Viruses Viruses 67.6 7.71e-7   NTclustered gi|2557646933|emb|OY676332.1| 2697049 g5792 i0 97.5 16.7208333333333 40 0 17 1 29 68 17603 17641 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4013 67.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9072350 9072350 PRJEB9859_P_NODE_1828_length_328_cov_4263.538462_g1793_i0 PRJEB9859 1828 328 4263.538462 13984.40615536 Betacoronavirus pandemicum 3418604 Viruses Viruses 80.5 1.42e-10   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g1793 i0 96 11.4878048780488 50 1 15 1 49 97 29915 29964 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3768 80.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9072378 9072378 PRJEB9859_P_NODE_3008_length_281_cov_11190.285714_g2973_i0 PRJEB9859 3008 281 11190.285714 31444.70285634 Narnavirus sp. 2587225 Viruses Viruses 67.6 9.25e-7   NTclustered gi|2686256125|emb|OZ008436.1| 2587225 g2973 i0 97.5 13.6334519572954 40 0 14 1 70 109 1072 1110 Apocryptovirus menelaus Segment 2, partial CDS blastn 3831 67.6 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
10348058 10348058 PRJEB9859_P_NODE_5829_length_240_cov_12923.151659_g5794_i0 PRJEB9859 5829 240 12923.151659 31015.5639816 Narnavirus sp. 2587225 Viruses Viruses 69.4 2.14e-7   NTclustered gi|2686256125|emb|OZ008436.1| 2587225 g5794 i0 100 16.025 37 0 15 0 32 68 78 42 Apocryptovirus menelaus Segment 2, partial CDS blastn 3846 69.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
10348071 10348071 PRJEB9859_P_NODE_6769_length_217_cov_1694.420213_g6734_i0 PRJEB9859 6769 217 1694.420213 3676.89186221 Betacoronavirus pandemicum 3418604 Viruses Viruses 73.1 1.47e-8   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g6734 i0 94 15.5760368663594 50 0 22 2 75 121 29911 29960 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3380 73.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12477920 12477920 PRJEB9859_P_NODE_3130_length_277_cov_11444.141129_g3095_i0 PRJEB9859 3130 277 11444.141129 31700.27092733 Viruses 10239 Viruses Viruses 65.8 3.27e-6   NTclustered gi|2557646933|emb|OY676332.1| 2697049 g3095 i0 97.436 14.5595667870036 39 0 14 1 173 210 17641 17603 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4033 65.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
14173501 14173501 PRJEB9859_P_NODE_1252_length_368_cov_3686.058997_g1218_i0 PRJEB9859 1252 368 3686.058997 13564.69710896 Betacoronavirus pandemicum 3418604 Viruses Viruses 80.5 1.6e-10   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g1218 i0 96 9.94565217391304 50 1 13 1 232 280 29964 29915 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3660 80.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
14173517 14173517 PRJEB9859_P_NODE_2012_length_318_cov_4306.297578_g1977_i0 PRJEB9859 2012 318 4306.297578 13694.02629804 Betacoronavirus pandemicum 3418604 Viruses Viruses 78.7 4.92e-10   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g1977 i0 95.918 11.0283018867925 49 1 15 1 40 87 29916 29964 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3507 78.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
15447627 15447627 PRJEB9859_P_NODE_2013_length_318_cov_4177.031142_g1978_i0 PRJEB9859 2013 318 4177.031142 13282.95903156 Betacoronavirus pandemicum 3418604 Viruses Viruses 84.2 1.06e-11   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g1978 i0 94.545 12.7264150943396 55 2 17 1 34 87 29910 29964 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4047 84.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
15447639 15447639 PRJEB9859_P_NODE_2793_length_288_cov_4712.413127_g2758_i0 PRJEB9859 2793 288 4712.413127 13571.74980576 Betacoronavirus pandemicum 3418604 Viruses Viruses 80.5 1.22e-10   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g2758 i0 96 13.2291666666667 50 1 17 1 9 57 29915 29964 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3810 80.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16721759 16721759 PRJEB9859_P_NODE_2014_length_318_cov_4141.653979_g1979_i0 PRJEB9859 2014 318 4141.653979 13170.45965322 Betacoronavirus pandemicum 3418604 Viruses Viruses 78.7 4.92e-10   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g1979 i0 95.918 11.6320754716981 49 1 15 1 232 279 29964 29916 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3699 78.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16721827 16721827 PRJEB9859_P_NODE_6074_length_233_cov_994.093137_g6039_i0 PRJEB9859 6074 233 994.093137 2316.23700921 Betacoronavirus pandemicum 3418604 Viruses Viruses 76.8 1.24e-9   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g6039 i0 95.833 14.68669527897 48 1 20 1 172 218 29916 29963 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3422 76.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16721830 16721830 PRJEB9859_P_NODE_6254_length_228_cov_12429.467337_g6219_i0 PRJEB9859 6254 228 12429.467337 28339.18552836 Betacoronavirus pandemicum 3418604 Viruses Viruses 78.7 3.35e-10   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g6219 i0 94.118 16.8201754385965 51 3 22 0 69 119 29914 29964 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3835 78.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
17996679 17996679 PRJEB9859_P_NODE_5655_length_241_cov_13280.632075_g5620_i0 PRJEB9859 5655 241 13280.632075 32006.32330075 Narnavirus sp. 2587225 Viruses Viruses 69.4 2.15e-7   NTclustered gi|2686256125|emb|OZ008436.1| 2587225 g5620 i0 100 15.8589211618257 37 0 15 0 173 209 1110 1074 Apocryptovirus menelaus Segment 2, partial CDS blastn 3822 69.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
19270480 19270480 PRJEB9859_P_NODE_3096_length_278_cov_872.795181_g3061_i0 PRJEB9859 3096 278 872.795181 2426.37060318 Betacoronavirus pandemicum 3418604 Viruses Viruses 76.8 1.52e-9   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g3061 i0 95.833 11.6007194244604 48 1 17 1 217 263 29916 29963 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3225 76.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
20125561 20125561 PRJEB9859_P_NODE_5456_length_242_cov_13063.751174_g5421_i0 PRJEB9859 5456 242 13063.751174 31614.27784108 Viruses 10239 Viruses Viruses 67.6 7.78e-7   NTclustered gi|2557657929|emb|OY694257.1| 2697049 g5421 i0 100 16.8223140495868 36 0 15 0 35 70 22476 22511 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4071 67.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
20125564 20125564 PRJEB9859_P_NODE_5656_length_241_cov_13236.613208_g5621_i0 PRJEB9859 5656 241 13236.613208 31900.23783128 Viruses 10239 Viruses Viruses 67.6 7.75e-7   NTclustered gi|2565351231|emb|OY624745.1| 2697049 g5621 i0 100 16.0290456431535 36 0 15 0 173 208 12795 12760 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3863 67.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
21821807 21821807 PRJEB9859_P_NODE_5458_length_242_cov_12801.469484_g5423_i0 PRJEB9859 5458 242 12801.469484 30979.55615128 Betacoronavirus pandemicum 3418604 Viruses Viruses 67.6 7.78e-7   NTclustered gi|2557422028|emb|OY662395.1| 2697049 g5423 i0 97.5 16.0909090909091 40 0 17 1 173 212 9677 9639 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3894 67.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23097056 23097056 PRJEB9859_P_NODE_1359_length_360_cov_3577.927492_g1324_i0 PRJEB9859 1359 360 3577.927492 12880.5389712 Betacoronavirus pandemicum 3418604 Viruses Viruses 78.7 5.63e-10   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g1324 i0 95.918 10.4833333333333 49 1 13 1 82 129 29916 29964 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3774 78.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
24370793 24370793 PRJEB9859_P_NODE_2140_length_313_cov_4382.644366_g2105_i0 PRJEB9859 2140 313 4382.644366 13717.67686558 Betacoronavirus pandemicum 3418604 Viruses Viruses 78.7 4.83e-10   NTclustered gi|2165834141|emb|OV195847.1| 2697049 g2105 i0 95.918 11.3674121405751 49 1 15 1 35 82 29916 29964 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3558 78.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;