RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB8827" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB8827 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25666278 25666278 PRJEB8827h_S_NODE_25002_length_179_cov_1.944444_g24983_i0 PRJEB8827 25002 179 1.944444 3.48055476 Calcarisporiella thermophila 911321 Fungi Fungi 84.2 5.38e-12   NTclustered gi|2837835806|ref|XM_069400798.1| 911321 g24983 i0 90.476 1.22905027932961 63 6 35 0 24 86 321 259 Calcarisporiella thermophila ribosomal protein P1 (VTP21DRAFT_9810), partial mRNA blastn 220 84.2 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
25938713 25938713 PRJEB8827h_S_NODE_40252_length_165_cov_2.153846_g40233_i0 PRJEB8827 40252 165 2.153846 3.5538459 Rhizopus delemar RA 99-88 936053 Fungi Fungi 106 1.04e-18   NTclustered gi|2797407539|ref|XM_067655554.1| 246409 g40233 i0 85.859 6.64848484848485 99 14 60 0 1 99 425 327 Rhizopus delemar RA 99-880 40S ribosomal protein S18 (RO3G_00963), partial mRNA blastn 1097 106 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
26074626 26074626 PRJEB8827g_S_NODE_981_length_294_cov_1.953668_g960_i0 PRJEB8827 981 294 1.953668 5.74378392 Rhizomucor pusillus 4840 Fungi Fungi 100 9.6e-17   NTclustered gi|2837748244|ref|XM_069380414.1| 4840 g960 i0 93.939 3.6156462585034 66 4 22 0 197 262 660 595 Rhizomucor pusillus 40S ribosomal uS13 domain-containing protein (VTP01DRAFT_2000), partial mRNA blastn 1063 100 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
26345912 26345912 PRJEB8827b_S_NODE_38391_length_161_cov_4.079365_g38339_i0 PRJEB8827 38391 161 4.079365 6.56777765 Mucor mucedo 29922 Fungi Fungi 52.8 0.013   NTclustered gi|2324051988|ref|XM_051607308.1| 29922 g38339 i0 100 0.173913043478261 28 0 17 0 17 44 2838 2811 Mucor mucedo clustered mitochondria-domain-containing protein (EV154DRAFT_602647), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;