RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB83711" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB83711 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7796345 7796345 PRJEB83711_P_NODE_38387_length_293_cov_1.995455_g38121_i0 PRJEB83711 38387 293 1.995455 5.84668315 Urbifossiella limnaea 2528023 Bacteria Bacteria 191 5.52e-44   NTclustered gi|1712585314|gb|CP036273.1| 2528023 g38121 i0 90.909 1.4778156996587 143 11 48 2 1 142 5053042 5052901 Urbifossiella limnaea strain ETA_A1 chromosome, complete genome blastn 433 191 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Urbifossiella Urbifossiella limnaea
19269932 19269932 PRJEB83711_P_NODE_61376_length_251_cov_0.876404_g61110_i0 PRJEB83711 61376 251 0.876404 2.19977404 Phycisphaeraceae bacterium 2026777 Bacteria Bacteria 363 9.249999999999997e-96   NTclustered gi|2076441902|gb|CP075368.1| 2026777 g61110 i0 93.117 112.669322709163 247 17 98 0 1 247 2582756 2583002 MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome blastn 28280 363 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;