RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB83711" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 4 ✖

bioproject 1

  • PRJEB83711 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2694560 2694560 PRJEB83711_P_NODE_61143_length_251_cov_0.876404_g60877_i0 PRJEB83711 61143 251 0.876404 2.19977404 Monoraphidium neglectum 145388 Plants Plants 237 5.85e-58   NTclustered gi|926764325|ref|XM_014035761.1| 145388 g60877 i0 83.871 1.58167330677291 248 40 99 0 4 251 255 8 Monoraphidium neglectum hypothetical protein mRNA blastn 397 237 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
2694874 2694874 PRJEB83711_P_NODE_74723_length_244_cov_0.912281_g74457_i0 PRJEB83711 74723 244 0.912281 2.22596564 Dunaliella salina 3046 Plants Plants 226 1.23e-54   NTclustered gi|81237624|gb|AY965896.2| 3046 g74457 i0 91.463 28.7704918032787 164 14 67 0 81 244 803 640 Dunaliella salina 14-3-3 protein mRNA, complete cds blastn 7020 226 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
21821560 21821560 PRJEB83711_P_NODE_77998_length_242_cov_1.491124_g77732_i0 PRJEB83711 77998 242 1.491124 3.60852008 Chlorella variabilis 554065 Plants Plants 267 7.15e-67   NTclustered gi|552838218|ref|XM_005849470.1| 554065 g77732 i0 89.855 59.3223140495868 207 21 86 0 2 208 231 25 Chlorella variabilis 40S ribosomal protein S15 (CHLNCDRAFT_59623) mRNA, complete cds blastn 14356 267 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
23095894 23095894 PRJEB83711_P_NODE_34579_length_307_cov_1.333333_g34313_i0 PRJEB83711 34579 307 1.333333 4.09333231 Chlorella variabilis 554065 Plants Plants 329 1.18e-85   NTclustered gi|552813385|ref|XM_005843877.1| 554065 g34313 i0 90.984 14.2508143322476 244 22 79 0 64 307 1066 1309 Chlorella variabilis hypothetical protein (CHLNCDRAFT_59785) mRNA, complete cds blastn 4375 329 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;