RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB83101" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB83101 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
142178 142178 PRJEB83101_P_NODE_51241_length_274_cov_1.393035_g50936_i0 PRJEB83101 51241 274 1.393035 3.8169159 Aeoliella mucimassa 2527972 Bacteria Bacteria 191 5.11e-44   NTclustered gi|1712622222|gb|CP036278.1| 2527972 g50936 i0 79.699 40.2481751824818 266 52 97 2 1 265 2585687 2585951 Aeoliella mucimassa strain Pan181 chromosome, complete genome blastn 11028 191 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Lacipirellulaceae Aeoliella Aeoliella mucimassa
2692252 2692252 PRJEB83101_P_NODE_50643_length_275_cov_1.386139_g50338_i0 PRJEB83101 50643 275 1.386139 3.81188225 Lacipirellula limnantheis 2528024 Bacteria Bacteria 329 1.04e-85   NTclustered gi|1712529062|gb|CP036339.1| 2528024 g50338 i0 88.321 0.996363636363636 274 32 99 0 1 274 5593835 5593562 Lacipirellula limnantheis strain I41 chromosome blastn 274 329 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Lacipirellulaceae Lacipirellula Lacipirellula limnantheis
21818954 21818954 PRJEB83101_P_NODE_53078_length_271_cov_1.313131_g52773_i0 PRJEB83101 53078 271 1.313131 3.55858501 Tautonia plasticadhaerens 2527974 Bacteria Bacteria 143 1.43e-29   NTclustered gi|1712713678|gb|CP036426.1| 2527974 g52773 i0 77.953 6.85608856088561 254 38 87 13 29 264 4831112 4831365 Tautonia plasticadhaerens strain ElP chromosome blastn 1858 143 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Tautonia Tautonia plasticadhaerens
24368863 24368863 PRJEB83101_P_NODE_85720_length_242_cov_0.923077_g85415_i0 PRJEB83101 85720 242 0.923077 2.23384634 Humisphaera borealis 2807512 Bacteria Bacteria 281 2.55e-71   NTclustered gi|1927742986|gb|CP063458.1| 2807512 g85415 i0 88.987 34.1198347107438 227 25 94 0 3 229 2080087 2080313 Humisphaera borealis strain M1803 chromosome, complete genome blastn 8257 281 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae Humisphaera Humisphaera borealis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;