RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB83101" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJEB83101 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3968315 3968315 PRJEB83101_P_NODE_50684_length_275_cov_1.301980_g50379_i0 PRJEB83101 50684 275 1.30198 3.580445 Sesamum betacytorhabdovirus 1_Cat 3078362 Viruses Viruses 479 9.78e-131   NTclustered gi|2618835764|tpg|BK064337.1| 3078362 g50379 i0 98.175 1.99272727272727 274 5 99 0 1 274 5125 5398 TPA_asm: Sesamum betacytorhabdovirus 1_Cat cRNA sequence blastn 548 479 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Sesamum betacytorhabdovirus 1_Cat
7794122 7794122 PRJEB83101_P_NODE_36887_length_306_cov_1.729614_g36582_i0 PRJEB83101 36887 306 1.729614 5.29261884 Zebrafish picornavirus 1 2304617 Viruses Viruses 494 3.95e-135   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g36582 i0 95.752 3 306 13 100 0 1 306 1239 934 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 918 494 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
19266749 19266749 PRJEB83101_P_NODE_19476_length_420_cov_1.737752_g19173_i0 PRJEB83101 19476 420 1.737752 7.2985584 Alphanucleorhabdovirus morogoromaydis 2734367 Viruses Viruses 403 9.69e-108   NTclustered gi|1547070460|gb|MK112501.2| 2497337 g19173 i0 84.135 0.990476190476191 416 66 99 0 3 418 2418 2003 Morogoro maize-associated virus isolate 16-0121 nucleocapsid protein, phosphoprotein, putative movement protein, matrix protein, glycoprotein, and RNA-dependent RNA polymerase genes, complete cds blastn 416 403 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Alphanucleorhabdovirus Alphanucleorhabdovirus morogoromaydis
21818924 21818924 PRJEB83101_P_NODE_51918_length_273_cov_1.185000_g51613_i0 PRJEB83101 51918 273 1.185 3.23505 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 416 7.709999999999998e-112   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g51613 i0 94.139 1 273 16 100 0 1 273 2383 2111 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 273 416 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;