RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB83101" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 8 ✖

bioproject 1

  • PRJEB83101 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7793407 7793407 PRJEB83101_P_NODE_14227_length_502_cov_4.715618_g13930_i0 PRJEB83101 14227 502 4.715618 23.67240236 Cetobacterium somerae 188913 Bacteria Bacteria 881 0   NTclustered gi|2666488225|gb|CP143319.1| 188913 g13930 i0 98.406 521.284860557769 502 7 100 1 1 502 1318969 1318469 Cetobacterium somerae strain ceto chromosome, complete genome blastn 261685 881 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
8651189 8651189 PRJEB83101_P_NODE_5307_length_888_cov_7.471166_g5062_i0 PRJEB83101 5307 888 7.471166 66.34395408 Cetobacterium 180162 Bacteria Bacteria 1607 0   NTclustered gi|2865368125|gb|CP122294.1| 188913 g5062 i0 99.324 526.05518018018 888 6 100 0 1 888 279559 278672 Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence blastn 467137 1607 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
8651319 8651319 PRJEB83101_P_NODE_67327_length_252_cov_0.871508_g67022_i0 PRJEB83101 67327 252 0.871508 2.19620016 Cetobacterium 180162 Bacteria Bacteria 466 6.89e-127   NTclustered gi|2666488225|gb|CP143319.1| 188913 g67022 i0 100 5.46031746031746 252 0 100 0 1 252 365840 366091 Cetobacterium somerae strain ceto chromosome, complete genome blastn 1376 466 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
11621148 11621148 PRJEB83101_P_NODE_69630_length_250_cov_3.016949_g69325_i0 PRJEB83101 69630 250 3.016949 7.5423725 Fusobacterium pseudoperiodonticum 2663009 Bacteria Bacteria 462 8.83e-126   NTclustered gi|1276705688|gb|CP024698.1| 2663009 g69325 i0 100 486.4 250 0 100 0 1 250 508774 508525 Fusobacterium pseudoperiodonticum strain KCOM 1283 chromosome, complete genome blastn 121600 462 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium pseudoperiodonticum
14171112 14171112 PRJEB83101_P_NODE_68412_length_251_cov_1.393258_g68107_i0 PRJEB83101 68412 251 1.393258 3.49707758 Fusobacterium pseudoperiodonticum 2663009 Bacteria Bacteria 464 2.47e-126   NTclustered gi|1276716588|gb|CP024703.1| 2663009 g68107 i0 100 12 251 0 100 0 1 251 1837916 1837666 Fusobacterium pseudoperiodonticum strain KCOM 2305 chromosome, complete genome blastn 3012 464 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium pseudoperiodonticum
15025867 15025867 PRJEB83101_P_NODE_55352_length_267_cov_1.608247_g55047_i0 PRJEB83101 55352 267 1.608247 4.29401949 Fusobacterium 848 Bacteria Bacteria 427 3.47e-115   NTclustered gi|2704942200|gb|CP077195.1| 285729 g55047 i0 95.506 99.7116104868914 267 12 100 0 1 267 2108164 2108430 Fusobacterium canifelinum strain SB044 chromosome, complete genome blastn 26623 427 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium canifelinum
15445122 15445122 PRJEB83101_P_NODE_63173_length_255_cov_1.714286_g62868_i0 PRJEB83101 63173 255 1.714286 4.3714293 Fusobacterium pseudoperiodonticum 2663009 Bacteria Bacteria 460 3.25e-125   NTclustered gi|1276714546|gb|CP024702.1| 2663009 g62868 i0 99.216 99.6941176470588 255 2 100 0 1 255 938880 938626 Fusobacterium pseudoperiodonticum strain KCOM 1282 chromosome, complete genome blastn 25422 460 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium pseudoperiodonticum
21400301 21400301 PRJEB83101_P_NODE_76617_length_247_cov_0.896552_g76312_i0 PRJEB83101 76617 247 0.896552 2.21448344 Fusobacterium 848 Bacteria Bacteria 457 4.05e-124   NTclustered gi|2706407748|gb|CP077116.1| 76857 g76312 i0 100 100 247 0 100 0 1 247 1829908 1830154 Fusobacterium polymorphum strain KCOM1257 chromosome, complete genome blastn 24700 457 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium polymorphum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;