RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJEB82358" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

  • Viruses · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJEB82358 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
140814 140814 PRJEB82358_P_NODE_18201_length_244_cov_0.900585_g18190_i0 PRJEB82358 18201 244 0.900585 2.1974274 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 451 1.86e-122   NTclustered gi|747017592|dbj|AB850660.1| 10376 g18190 i0 100 105.446721311475 244 0 100 0 1 244 11179 10936 Human herpesvirus 4 DNA, complete genome, strain: HN18 blastn 25729 451 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
2690858 2690858 PRJEB82358_P_NODE_14523_length_266_cov_9.414508_g14512_i0 PRJEB82358 14523 266 9.414508 25.04259128 Caudoviricetes sp. 2832643 Viruses Viruses 215 2.93e-51   NTclustered gi|2914941188|gb|OR221748.1| 2832643 g14512 i0 89.941 0.635338345864662 169 13 63 4 9 176 166 1 MAG: Caudoviricetes sp. isolate MSP1278 genomic sequence blastn 169 215 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
2690963 2690963 PRJEB82358_P_NODE_4423_length_441_cov_3.809783_g4412_i0 PRJEB82358 4423 441 3.809783 16.80114303 Caudoviricetes sp. 2832643 Viruses Viruses 390 7.96e-104   NTclustered gi|2915035437|gb|OR222691.1| 2832643 g4412 i0 86.857 72.1292517006803 350 44 79 2 90 438 18529 18181 MAG: Caudoviricetes sp. isolate MSP0240 genomic sequence blastn 31809 390 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5243534 5243534 PRJEB82358_S_NODE_5_length_242_cov_1.627219_g4_i0 PRJEB82358 5 242 1.627219 3.93786998 Caudoviricetes sp. 2832643 Viruses Viruses 54.7 0.006   NTclustered gi|2059612120|tpg|BK037321.1| 2832643 g4 i0 100 0.37603305785124 29 0 12 0 214 242 23579 23607 MAG TPA_asm: Caudoviricetes sp. isolate ct2AU18, partial genome blastn 91 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
9068100 9068100 PRJEB82358_P_NODE_14348_length_268_cov_2.584615_g14337_i0 PRJEB82358 14348 268 2.584615 6.9267682 Caudoviricetes sp. 2832643 Viruses Viruses 355 1.67e-93   NTclustered gi|2053017625|tpg|BK023808.1| 2832643 g14337 i0 91.473 0.962686567164179 258 22 96 0 11 268 23614 23871 MAG TPA_asm: Caudoviricetes sp. isolate ctB811, partial genome blastn 258 355 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10343763 10343763 PRJEB82358_P_NODE_14349_length_268_cov_2.548718_g14338_i0 PRJEB82358 14349 268 2.548718 6.83056424 Caudoviricetes sp. 2832643 Viruses Viruses 484 2.0399999999999996e-132   NTclustered gi|2053036246|tpg|BK024160.1| 2832643 g14338 i0 99.254 3.90671641791045 268 2 100 0 1 268 7421 7688 MAG TPA_asm: Caudoviricetes sp. isolate ct1rL2, partial genome blastn 1047 484 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
15443285 15443285 PRJEB82358_P_NODE_15373_length_260_cov_2.973262_g15362_i0 PRJEB82358 15373 260 2.973262 7.7304812 Caudoviricetes sp. 2832643 Viruses Viruses 481 2.55e-131   NTclustered gi|2053036246|tpg|BK024160.1| 2832643 g15362 i0 100 1.87692307692308 260 0 100 0 1 260 6460 6201 MAG TPA_asm: Caudoviricetes sp. isolate ct1rL2, partial genome blastn 488 481 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
15443340 15443340 PRJEB82358_P_NODE_22753_length_208_cov_4.792593_g22742_i0 PRJEB82358 22753 208 4.792593 9.96859344 Caudoviricetes sp. 2832643 Viruses Viruses 385 1.58e-102   NTclustered gi|2053036246|tpg|BK024160.1| 2832643 g22742 i0 100 3.01923076923077 208 0 100 0 1 208 7241 7034 MAG TPA_asm: Caudoviricetes sp. isolate ct1rL2, partial genome blastn 628 385 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
17992455 17992455 PRJEB82358_P_NODE_695_length_786_cov_24.791024_g686_i0 PRJEB82358 695 786 24.791024 194.85744864 Caudoviricetes sp. 2832643 Viruses Viruses 257 1.5600000000000001e-63   NTclustered gi|2054596226|tpg|BK021635.1| 2832643 g686 i0 78.412 2.63994910941476 403 81 99 3 6 408 13283 13679 MAG TPA_asm: Caudoviricetes sp. isolate ctG972, partial genome blastn 2075 257 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
20541757 20541757 PRJEB82358_P_NODE_17097_length_249_cov_0.875000_g17086_i0 PRJEB82358 17097 249 0.875 2.17875 Caudoviricetes sp. 2832643 Viruses Viruses 427 3.2e-115   NTclustered gi|2914941530|gb|OR221752.1| 2832643 g17086 i0 100 0.927710843373494 231 0 93 0 1 231 39674 39444 MAG: Caudoviricetes sp. isolate MSP1281 genomic sequence blastn 231 427 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
20541792 20541792 PRJEB82358_P_NODE_21957_length_216_cov_5.951049_g21946_i0 PRJEB82358 21957 216 5.951049 12.85426584 Caudoviricetes sp. 2832643 Viruses Viruses 344 2.81e-90   NTclustered gi|2053036246|tpg|BK024160.1| 2832643 g21946 i0 100 0.861111111111111 186 0 86 0 31 216 3821 3636 MAG TPA_asm: Caudoviricetes sp. isolate ct1rL2, partial genome blastn 186 344 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
21817515 21817515 PRJEB82358_P_NODE_11758_length_291_cov_3.761468_g11747_i0 PRJEB82358 11758 291 3.761468 10.94587188 Caudoviricetes sp. 2832643 Viruses Viruses 446 1.06e-120   NTclustered gi|2053036246|tpg|BK024160.1| 2832643 g11747 i0 100 8.94845360824742 241 0 83 0 30 270 5727 5967 MAG TPA_asm: Caudoviricetes sp. isolate ct1rL2, partial genome blastn 2604 446 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24366650 24366650 PRJEB82358_P_NODE_23720_length_198_cov_8.576000_g23709_i0 PRJEB82358 23720 198 8.576 16.98048 Thermus phage YS40_Isch 2494333 Viruses Viruses 139 1.2799999999999999e-28   NTclustered gi|1549118528|gb|MK257744.1| 2494333 g23709 i0 92 0.505050505050505 100 7 50 1 67 165 19473 19374 Thermus phage YS40_Isch, complete genome blastn 100 139 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Thermus phage YS40_Isch

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;