RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJEB82358" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB82358 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1415362 1415362 PRJEB82358_P_NODE_12802_length_281_cov_5.110577_g12791_i0 PRJEB82358 12802 281 5.110577 14.36072137 Colletotrichum karsti 1095194 Fungi Fungi 148 3.2099999999999996e-31   NTclustered gi|1955532021|ref|XM_038884777.1| 1095194 g12791 i0 77.47 4.85053380782918 253 53 89 3 31 281 1660 1910 Colletotrichum karsti uncharacterized protein (CkaCkLH20_02058), partial mRNA blastn 1363 148 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum karsti
6518982 6518982 PRJEB82358_P_NODE_13706_length_273_cov_3.450000_g13695_i0 PRJEB82358 13706 273 3.45 9.4185 Debaryomyces hansenii 4959 Fungi Fungi 411 3.5899999999999996e-110   NTclustered gi|294658719|ref|XM_002770786.1| 284592 g13695 i0 95.686 0.934065934065934 255 11 93 0 19 273 1047 1301 Debaryomyces hansenii CBS767 DEHA2F15950p (DEHA2F15950g), partial mRNA blastn 255 411 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Debaryomyces Debaryomyces hansenii
9925468 9925468 PRJEB82358_P_NODE_17348_length_247_cov_8.741379_g17337_i0 PRJEB82358 17348 247 8.741379 21.59120613 Saccharomyces 4930 Fungi Fungi 355 1.52e-93   NTclustered gi|334302503|gb|JF513093.1| 4932 g17337 i0 98.522 92.7692307692308 203 0 96 2 12 211 98 300 Saccharomyces cerevisiae isolate BCA11 26S ribosomal RNA gene, partial sequence blastn 22914 355 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
10343818 10343818 PRJEB82358_P_NODE_21649_length_220_cov_4.319728_g21638_i0 PRJEB82358 21649 220 4.319728 9.5034016 Geosmithia morbida 1094350 Fungi Fungi 255 1.38e-63   NTclustered gi|1868475290|ref|XM_035468563.1| 1094350 g21638 i0 88.263 85.5909090909091 213 25 97 0 8 220 2759 2547 Geosmithia morbida clathrin heavy chain (GMORB2_6593), partial mRNA blastn 18830 255 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Bionectriaceae Geosmithia Geosmithia morbida
12476366 12476366 PRJEB82358_P_NODE_16030_length_255_cov_4.340659_g16019_i0 PRJEB82358 16030 255 4.340659 11.06868045 root 1 Root_unresolved Root_unresolved 403 5.55e-108   NTclustered gi|1389182097|gb|CP029160.1| 4932 g16019 i0 100 97.0549019607843 218 0 85 0 23 240 3881527 3881744 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 24749 403 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
17575363 17575363 PRJEB82358_P_NODE_22534_length_210_cov_4.890511_g22523_i0 PRJEB82358 22534 210 4.890511 10.2700731 Cordycipitaceae 474943 Fungi Fungi 318 1.6499999999999995e-82   NTclustered gi|2130472288|gb|OL412160.1| 132112 g22523 i0 96.41 92.9619047619048 195 4 92 3 1 193 10 203 Simplicillium lanosoniveum strain NU17 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 19522 318 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Cordycipitaceae Simplicillium Simplicillium lanosoniveum
21817564 21817564 PRJEB82358_P_NODE_18638_length_242_cov_0.911243_g18627_i0 PRJEB82358 18638 242 0.911243 2.20520806 Debaryomyces hansenii 4959 Fungi Fungi 305 1.52e-78   NTclustered gi|50422736|ref|XM_459945.1| 284592 g18627 i0 93.627 1.68595041322314 204 13 84 0 39 242 1037 834 Debaryomyces hansenii CBS767 DEHA2E14740p (DEHA2E14740g), partial mRNA blastn 408 305 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Debaryomyces Debaryomyces hansenii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;