RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB82358" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB82358 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17992332 17992332 PRJEB82358_P_NODE_17495_length_247_cov_1.379310_g17484_i0 PRJEB82358 17495 247 1.37931 3.4068957 uncultured Thermoanaerobaculia bacterium 3036248 Bacteria Bacteria 174 4.57e-39   NTclustered gi|2518540615|emb|OX638294.1| 3036248 g17484 i0 86.25 40.7692307692308 160 22 65 0 87 246 667249 667408 MAG: uncultured Thermoanaerobaculia bacterium isolate 42478a12-5572-4d71-959b-92ffd854a98d genome assembly, chromosome: 1 blastn 10070 174 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       uncultured Thermoanaerobaculia bacterium
20541782 20541782 PRJEB82358_P_NODE_20157_length_232_cov_2.446541_g20146_i0 PRJEB82358 20157 232 2.446541 5.67597512 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 300 6.71e-77   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g20146 i0 93.137 55.2327586206897 204 14 88 0 24 227 3557229 3557026 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 12814 300 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;