RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB81463" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB81463 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2690562 2690562 PRJEB81463_P_NODE_22643_length_249_cov_2.107955_g22371_i0 PRJEB81463 22643 249 2.107955 5.24880795 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 113 1.02e-20   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g22371 i0 79.888 0.718875502008032 179 17 66 13 85 248 835 1009 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 179 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
12894262 12894262 PRJEB81463_P_NODE_9291_length_330_cov_2.789883_g9019_i0 PRJEB81463 9291 330 2.789883 9.2066139 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 409 1.5999999999999998e-109   NTclustered gi|68479954|gb|DQ076149.1| 6182 g9019 i0 89.058 0.996969696969697 329 36 99 0 2 330 21 349 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 329 409 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;