RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB81463" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB81463 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12893848 12893848 PRJEB81463_P_NODE_12151_length_292_cov_3.027397_g11879_i0 PRJEB81463 12151 292 3.027397 8.83999924 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 231 3.24e-56   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g11879 i0 81.757 20.4760273972603 296 37 100 12 1 292 3723 4005 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 5979 231 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
16300011 16300011 PRJEB81463_P_NODE_10773_length_309_cov_4.656780_g10501_i0 PRJEB81463 10773 309 4.65678 14.3894502 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 372 1.95e-98   NTclustered gi|160337402|gb|EF455799.1| 188939 g10501 i0 88.779 98.1974110032362 303 34 98 0 6 308 603 301 Thaumatomonas seravini beta-tubulin (btub) gene, partial cds blastn 30343 374 0.994652406417112 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas seravini
19266203 19266203 PRJEB81463_P_NODE_8176_length_351_cov_4.341727_g7904_i0 PRJEB81463 8176 351 4.341727 15.23946177 Mesofila sp. ATCC PRA-54 439948 SAR_Eukaryotes SAR_Eukaryotes 327 4.92e-85   NTclustered gi|160337400|gb|EF455798.1| 439948 g7904 i0 83.908 97.5128205128205 348 50 98 6 2 346 370 714 Dimorpha sp. ATCC PRA-54 clone 2 actin gene, partial cds blastn 34227 327 1 Eukaryota Sar   Cercozoa     Mesofilidae Mesofila Mesofila sp. ATCC PRA-54

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;