RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB81463" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB81463 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15442822 15442822 PRJEB81463_P_NODE_12573_length_290_cov_1.437788_g12301_i0 PRJEB81463 12573 290 1.437788 4.1695852 Luteitalea pratensis 1855912 Bacteria Bacteria 281 3.15e-71   NTclustered gi|1016914409|gb|CP015136.1| 1855912 g12301 i0 85.199 72.6862068965517 277 37 95 4 8 282 4198598 4198324 Luteitalea pratensis strain DSM 100886 chromosome, complete genome blastn 21079 281 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea pratensis
24366533 24366533 PRJEB81463_P_NODE_9780_length_322_cov_3.971888_g9508_i0 PRJEB81463 9780 322 3.971888 12.78947936 Mesoterricola sediminis 2927980 Bacteria Bacteria 80.5 1.39e-10   NTclustered gi|2490895851|dbj|AP027081.1| 2927980 g9508 i0 95.918 9.6583850931677 49 2 15 0 2 50 4453848 4453800 Mesoterricola sediminis W786 DNA, complete genome blastn 3110 80.5 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Mesoterricola Mesoterricola sediminis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;