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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJEB81463" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 22 ✖

bioproject 1

  • PRJEB81463 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
140643 140643 PRJEB81463_P_NODE_441_length_1438_cov_7.337729_g323_i0 PRJEB81463 441 1438 7.337729 105.51654302 Copromyxa protea 931554 Tubulinea other_Eukaryota 1266 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g323 i0 83.297 27.5785813630042 1389 217 96 11 17 1393 1 1386 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 39658 1266 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
997294 997294 PRJEB81463_P_NODE_12341_length_291_cov_2.779817_g12069_i0 PRJEB81463 12341 291 2.779817 8.08926747 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 207 5.44e-49   NTclustered gi|330790587|ref|XM_003283330.1| 5786 g12069 i0 83.945 101.168384879725 218 33 75 2 75 291 995 779 Dictyostelium purpureum ubiquitin (DICPUDRAFT_44796), mRNA blastn 29440 207 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
3966494 3966494 PRJEB81463_P_NODE_16104_length_271_cov_2.161616_g15832_i0 PRJEB81463 16104 271 2.161616 5.85797936 Platyamoeba placida 3454475 Discosea other_Eukaryota 372 1.68e-98   NTclustered gi|33946348|gb|AY294153.1| 197527 g15832 i0 91.76 98.1254612546125 267 22 99 0 4 270 569 835 Platyamoeba placida actin mRNA, partial cds blastn 26592 372 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
5243273 5243273 PRJEB81463_P_NODE_6105_length_405_cov_2.680723_g5833_i0 PRJEB81463 6105 405 2.680723 10.85692815 Saccamoeba lacustris 704142 Tubulinea other_Eukaryota 647 0   NTclustered gi|423292025|gb|JQ519458.1| 704142 g5833 i0 95.545 99.1506172839506 404 18 99 0 1 404 199 602 Saccamoeba lacustris clone JG10.115_b9 actin gene, partial cds blastn 40156 647 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba lacustris
5243276 5243276 PRJEB81463_P_NODE_6525_length_392_cov_1.457680_g6253_i0 PRJEB81463 6525 392 1.45768 5.7141056 Copromyxa sp. PKD 2011 1215977 Tubulinea other_Eukaryota 725 0   NTclustered gi|399764167|gb|JQ271678.1| 1215977 g6253 i0 100 77.4591836734694 392 0 100 0 1 392 1062 671 Copromyxa sp. PKD 2011 strain ZEB1 18S ribosomal RNA gene, partial sequence blastn 30364 725 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa sp. PKD 2011
6100537 6100537 PRJEB81463_P_NODE_28505_length_241_cov_3.279762_g28233_i0 PRJEB81463 28505 241 3.279762 7.90422642 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 222 1.56e-53   NTclustered gi|1042160947|dbj|LC102280.1| 239731 g28233 i0 85.253 1.82572614107884 217 30 90 2 26 241 348 133 Hartmannella cantabrigiensis gene for elongation factor 2 alpha, partial cds, strain: ALC3 blastn 440 224 0.991071428571429 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Hartmannella Hartmannella cantabrigiensis
6518520 6518520 PRJEB81463_P_NODE_12026_length_294_cov_1.131222_g11754_i0 PRJEB81463 12026 294 1.131222 3.32579268 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 121 7.37e-23   NTclustered gi|470526273|ref|XM_004356675.1| 1257118 g11754 i0 85.965 2.65986394557823 114 14 38 2 182 294 450 338 Acanthamoeba castellanii str. Neff ribosomal protein L19e, putative (ACA1_174910), partial mRNA blastn 782 121 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7792967 7792967 PRJEB81463_P_NODE_7607_length_364_cov_1.189003_g7335_i0 PRJEB81463 7607 364 1.189003 4.32797092 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 477 4.809999999999998e-130   NTclustered gi|659103926|gb|KJ569726.1| 1512276 g7335 i0 93.293 36.3241758241758 328 14 89 6 41 364 4 327 Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence blastn 13222 477 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
9068005 9068005 PRJEB81463_P_NODE_6868_length_381_cov_5.766234_g6596_i0 PRJEB81463 6868 381 5.766234 21.96935154 Saccamoeba limax 136464 Tubulinea other_Eukaryota 697 0   NTclustered gi|213950421|gb|EU869301.1| 136464 g6596 i0 99.737 23.0997375328084 380 1 99 0 2 381 1874 1495 Saccamoeba limax strain NTSHR small subunit ribosomal RNA gene, partial sequence blastn 8801 697 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba limax
11200722 11200722 PRJEB81463_P_NODE_9069_length_334_cov_2.291188_g8797_i0 PRJEB81463 9069 334 2.291188 7.65256792 Dictyostelium 5782 Evosea other_Eukaryota 243 1.7400000000000004e-59   NTclustered gi|167938|gb|M23749.1|DDIUBIQB 44689 g8797 i0 80.615 104.455089820359 325 54 96 7 13 334 36 354 D.discoideum ubiquitin mRNA, complete cds, clone DCUBV45 blastn 34888 243 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
12894182 12894182 PRJEB81463_P_NODE_491_length_1382_cov_3.245989_g366_i0 PRJEB81463 491 1382 3.245989 44.85956798 Copromyxa protea 931554 Tubulinea other_Eukaryota 1548 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g366 i0 87.192 27.5586107091172 1382 151 98 16 1 1360 1378 1 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 38086 1548 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
12894193 12894193 PRJEB81463_P_NODE_5771_length_416_cov_5.107872_g5499_i0 PRJEB81463 5771 416 5.107872 21.24874752 Saccamoeba limax 136464 Tubulinea other_Eukaryota 739 0   NTclustered gi|213950421|gb|EU869301.1| 136464 g5499 i0 98.801 42.1201923076923 417 2 99 1 2 415 745 1161 Saccamoeba limax strain NTSHR small subunit ribosomal RNA gene, partial sequence blastn 17522 739 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba limax
17992013 17992013 PRJEB81463_P_NODE_2275_length_670_cov_4.340034_g2012_i0 PRJEB81463 2275 670 4.340034 29.0782278 Saccamoeba limax 136464 Tubulinea other_Eukaryota 1055 0   NTclustered gi|213950421|gb|EU869301.1| 136464 g2012 i0 99.653 49.6880597014925 577 2 86 0 93 669 1 577 Saccamoeba limax strain NTSHR small subunit ribosomal RNA gene, partial sequence blastn 33291 1055 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba limax
17992156 17992156 PRJEB81463_P_NODE_30635_length_205_cov_5.492424_g30363_i0 PRJEB81463 30635 205 5.492424 11.2594692 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 265 2.11e-66   NTclustered gi|470421212|ref|XM_004337322.1| 1257118 g30363 i0 90.5 98.1512195121951 200 19 98 0 5 204 31 230 Acanthamoeba castellanii str. Neff actin, putative (ACA1_328920), partial mRNA blastn 20121 265 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17992229 17992229 PRJEB81463_P_NODE_7735_length_361_cov_2.211806_g7463_i0 PRJEB81463 7735 361 2.211806 7.98461966 Dictyostelium purpureum 5786 Evosea other_Eukaryota 250 1.13e-61   NTclustered gi|330818907|ref|XM_003291484.1| 5786 g7463 i0 79.83 15.8310249307479 352 63 97 6 1 349 356 10 Dictyostelium purpureum ribosomal protein L10E (DICPUDRAFT_92700), mRNA blastn 5715 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
20541243 20541243 PRJEB81463_P_NODE_11037_length_306_cov_1.330472_g10765_i0 PRJEB81463 11037 306 1.330472 4.07124432 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 566 8.239999999999998e-157   NTclustered gi|909719645|gb|KT185625.1| 5778 g10765 i0 100 61.7941176470588 306 0 100 0 1 306 6365 6060 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 18909 566 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
20541644 20541644 PRJEB81463_P_NODE_6697_length_386_cov_3.239617_g6425_i0 PRJEB81463 6697 386 3.239617 12.50492162 Dictyostelium discoideum 44689 Evosea other_Eukaryota 176 2.1e-39   NTclustered gi|66826022|ref|XM_641274.1| 352472 g6425 i0 86.709 4.44818652849741 158 21 41 0 189 346 200 43 Dictyostelium discoideum AX4 S60 ribosomal protein L36a (rpl36a) mRNA, complete cds blastn 1717 176 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
21817164 21817164 PRJEB81463_P_NODE_1798_length_750_cov_12.651403_g1555_i0 PRJEB81463 1798 750 12.651403 94.8855225 Platyamoeba placida 3454475 Discosea other_Eukaryota 913 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g1555 i0 88.829 98.6 743 83 99 0 2 744 89 831 Platyamoeba placida actin mRNA, partial cds blastn 73950 913 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
21817459 21817459 PRJEB81463_P_NODE_8018_length_355_cov_0.801418_g7746_i0 PRJEB81463 8018 355 0.801418 2.8450339 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 394 4.84e-105   NTclustered gi|659103923|gb|KJ569725.1| 1512276 g7746 i0 86.981 31.7408450704225 361 33 99 12 1 351 596 952 Cochliopodium kieliense clone 9601 18S ribosomal RNA gene, partial sequence blastn 11268 394 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
23092684 23092684 PRJEB81463_P_NODE_9899_length_321_cov_0.963710_g9627_i0 PRJEB81463 9899 321 0.96371 3.0935091 Dictyostelium purpureum 5786 Evosea other_Eukaryota 252 2.77e-62   NTclustered gi|330797960|ref|XM_003286977.1| 5786 g9627 i0 84.585 135.11214953271 253 39 79 0 69 321 535 283 Dictyostelium purpureum ubiquitin (DICPUDRAFT_94309), mRNA blastn 43371 252 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
24366475 24366475 PRJEB81463_P_NODE_5920_length_411_cov_1.976331_g5648_i0 PRJEB81463 5920 411 1.976331 8.12272041 Dictyostelium purpureum 5786 Evosea other_Eukaryota 326 2.11e-84   NTclustered gi|330822609|ref|XM_003291694.1| 5786 g5648 i0 81.297 5.67639902676399 401 75 98 0 11 411 145 545 Dictyostelium purpureum uncharacterized protein (rasG), mRNA blastn 2333 326 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
25223455 25223455 PRJEB81463_P_NODE_11240_length_303_cov_1.760870_g10968_i0 PRJEB81463 11240 303 1.76087 5.3354361 Acytosteliales 2058181 Evosea other_Eukaryota 230 1.2099999999999995e-55   NTclustered gi|470263923|ref|XM_004360999.1| 261658 g10968 i0 81.818 23.1815181518152 286 40 92 8 23 302 679 958 Cavenderia fasciculata vacuolar H+-ATPase A subunit (vatA), partial mRNA blastn 7024 230 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;