contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJEB81327" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139926 | 139926 | PRJEB81327_P_NODE_45021_length_252_cov_3.189944_g44413_i0 | PRJEB81327 | 45021 | 252 | 3.189944 | 8.03865888 | Treponema medium | 58231 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g44413 | i0 | 100 | 195.93253968254 | 252 | 0 | 100 | 0 | 1 | 252 | 1845860 | 1845609 | Treponema medium strain T19 chromosome, complete genome | blastn | 49375 | 466 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 139969 | 139969 | PRJEB81327_P_NODE_48021_length_250_cov_1.282486_g47413_i0 | PRJEB81327 | 48021 | 250 | 1.282486 | 3.206215 | Treponema denticola | 158 | Bacteria | Bacteria | 446 | 8.89e-121 | NTclustered | gi|2265190365|gb|CP054477.1| | 158 | g47413 | i0 | 98.8 | 31.572 | 250 | 3 | 100 | 0 | 1 | 250 | 2119243 | 2119492 | Treponema denticola strain OMZ 823 chromosome, complete genome | blastn | 7893 | 446 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 2271994 | 2271994 | PRJEB81327_P_NODE_21682_length_298_cov_2.040000_g21074_i0 | PRJEB81327 | 21682 | 298 | 2.04 | 6.0792 | Treponema | 157 | Bacteria | Bacteria | 534 | 2.26e-147 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g21074 | i0 | 98.993 | 194.926174496644 | 298 | 3 | 100 | 0 | 1 | 298 | 2079370 | 2079667 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 58088 | 534 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 3547850 | 3547850 | PRJEB81327_P_NODE_7423_length_516_cov_2.952596_g6819_i0 | PRJEB81327 | 7423 | 516 | 2.952596 | 15.23539536 | Treponema | 157 | Bacteria | Bacteria | 937 | 0 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g6819 | i0 | 99.419 | 196.085271317829 | 516 | 3 | 100 | 0 | 1 | 516 | 2739491 | 2738976 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 101180 | 937 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 12893108 | 12893108 | PRJEB81327_P_NODE_19411_length_310_cov_3.396624_g18803_i0 | PRJEB81327 | 19411 | 310 | 3.396624 | 10.5295344 | Treponema vincentii | 69710 | Bacteria | Bacteria | 187 | 7.61e-43 | NTclustered | gi|2034589463|gb|CP050497.1| | 69710 | g18803 | i0 | 89.726 | 3.29354838709677 | 146 | 15 | 95 | 0 | 163 | 308 | 2489746 | 2489891 | Treponema vincentii strain OMZ 806 chromosome, complete genome | blastn | 1021 | 187 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 14168099 | 14168099 | PRJEB81327_P_NODE_27372_length_283_cov_1.466667_g26764_i0 | PRJEB81327 | 27372 | 283 | 1.466667 | 4.15066761 | Treponema sp. Marseille-Q4132 | 2766701 | Bacteria | Bacteria | 490 | 4.67e-134 | NTclustered | gi|1897717435|gb|CP060591.1| | 2766701 | g26764 | i0 | 98.214 | 156.802120141343 | 280 | 5 | 99 | 0 | 1 | 280 | 2590451 | 2590730 | Treponema sp. Marseille-Q4132 chromosome | blastn | 44375 | 490 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. Marseille-Q4132 | ||
| 20123764 | 20123764 | PRJEB81327_P_NODE_65736_length_240_cov_3.203593_g65128_i0 | PRJEB81327 | 65736 | 240 | 3.203593 | 7.6886232 | Treponema | 157 | Bacteria | Bacteria | 444 | 3.05e-120 | NTclustered | gi|2265136109|gb|CP051197.1| | 69710 | g65128 | i0 | 100 | 184.720833333333 | 240 | 0 | 100 | 0 | 1 | 240 | 326286 | 326525 | Treponema vincentii strain OMZ 802 chromosome, complete genome | blastn | 44333 | 444 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 21816415 | 21816415 | PRJEB81327_P_NODE_22198_length_295_cov_5.954955_g21590_i0 | PRJEB81327 | 22198 | 295 | 5.954955 | 17.56711725 | Treponema sp. | 166 | Bacteria | Bacteria | 237 | 7.040000000000001e-58 | NTclustered | gi|2189480979|gb|CP091737.1| | 166 | g21590 | i0 | 81.915 | 1.91186440677966 | 282 | 49 | 95 | 2 | 7 | 287 | 30060 | 29780 | MAG: Treponema sp. isolate nC27_bin.160.fa chromosome | blastn | 564 | 237 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 21816512 | 21816512 | PRJEB81327_P_NODE_29538_length_279_cov_1.495146_g28930_i0 | PRJEB81327 | 29538 | 279 | 1.495146 | 4.17145734 | Brachyspira intermedia | 84377 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|343385146|gb|CP002874.1| | 1045858 | g28930 | i0 | 100 | 0.100358422939068 | 28 | 0 | 10 | 0 | 243 | 270 | 2801746 | 2801773 | Brachyspira intermedia PWS/A, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira intermedia | ||
| 23949753 | 23949753 | PRJEB81327_P_NODE_9959_length_434_cov_2.351801_g9351_i0 | PRJEB81327 | 9959 | 434 | 2.351801 | 10.20681634 | Treponema | 157 | Bacteria | Bacteria | 774 | 0 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g9351 | i0 | 98.848 | 189.267281105991 | 434 | 5 | 100 | 0 | 1 | 434 | 2078614 | 2078181 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 82142 | 780 | 0.992307692307692 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 24365659 | 24365659 | PRJEB81327_P_NODE_37960_length_264_cov_2.764398_g37352_i0 | PRJEB81327 | 37960 | 264 | 2.764398 | 7.29801072 | Treponema sp. Marseille-Q4132 | 2766701 | Bacteria | Bacteria | 483 | 7.219999999999998e-132 | NTclustered | gi|1897717435|gb|CP060591.1| | 2766701 | g37352 | i0 | 99.621 | 209.25 | 264 | 1 | 100 | 0 | 1 | 264 | 1779290 | 1779027 | Treponema sp. Marseille-Q4132 chromosome | blastn | 55242 | 483 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. Marseille-Q4132 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;