RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB81327" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB81327 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1414679 1414679 PRJEB81327_P_NODE_55702_length_246_cov_0.890173_g55094_i0 PRJEB81327 55702 246 0.890173 2.18982558 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 435 1.8900000000000003e-117   NTclustered gi|60698656|gb|AY915745.1| 6182 g55094 i0 98.77 14.8780487804878 244 3 99 0 1 244 195 438 Schistosoma japonicum SJCHGC09658 protein mRNA, partial cds blastn 3660 435 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
12893238 12893238 PRJEB81327_P_NODE_29411_length_279_cov_1.956311_g28803_i0 PRJEB81327 29411 279 1.956311 5.45810769 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 215 3.1e-51   NTclustered gi|60698656|gb|AY915745.1| 6182 g28803 i0 94.964 87.1254480286738 139 4 49 2 1 136 18 156 Schistosoma japonicum SJCHGC09658 protein mRNA, partial cds blastn 24308 215 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
18848677 18848677 PRJEB81327_P_NODE_34375_length_270_cov_2.994924_g33767_i0 PRJEB81327 34375 270 2.994924 8.0862948 Castrella 297437 Platyhelminthes Platyhelminthes 147 1.1000000000000001e-30   NTclustered gi|472441156|gb|KC529570.1| 297438 g33767 i0 90.179 43.762962962963 112 11 41 0 1 112 1075 964 Castrella truncata isolate UH335.2 28S ribosomal RNA gene, partial sequence blastn 11816 147 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Dalyelliidae Castrella Castrella truncata
23092191 23092191 PRJEB81327_P_NODE_8999_length_461_cov_2.074742_g8391_i0 PRJEB81327 8999 461 2.074742 9.56456062 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 819 0   NTclustered gi|1124902734|gb|AY812498.2| 6182 g8391 i0 98.698 78.0281995661605 461 6 100 0 1 461 40 500 Schistosoma japonicum SJCHGC01615 protein mRNA, partial cds blastn 35971 824 0.993932038834951 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
24365989 24365989 PRJEB81327_P_NODE_62660_length_242_cov_1.366864_g62052_i0 PRJEB81327 62660 242 1.366864 3.30781088 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|2318762372|ref|XM_051214595.1| 6185 g62052 i0 100 0.115702479338843 28 0 12 0 152 179 4399 4372 Schistosoma haematobium Syntaxin-1A (SYX1A_1), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;