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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB81327" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 6 ✖

tax_clade 1

bioproject 1

  • PRJEB81327 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6517792 6517792 PRJEB81327_P_NODE_18226_length_316_cov_2.666667_g17618_i0 PRJEB81327 18226 316 2.666667 8.42666772 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 176 1.68e-39   NTclustered gi|66359883|ref|XM_627120.1| 353152 g17618 i0 80.083 8.38924050632911 241 44 76 4 5 243 305 67 Cryptosporidium parvum Iowa II histone H2A (cgd8_2170) mRNA, complete cds blastn 2651 176 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
16299667 16299667 PRJEB81327_P_NODE_35013_length_269_cov_2.586735_g34405_i0 PRJEB81327 35013 269 2.586735 6.95831715 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 248 2.93e-61   NTclustered gi|2785765936|ref|XM_067218065.1| 5824 g34405 i0 83.271 172.758364312268 269 45 100 0 1 269 597 329 Plasmodium brasilianum polyubiquitin (MKS88_004855), partial mRNA blastn 46472 248 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
21816777 21816777 PRJEB81327_P_NODE_52278_length_248_cov_0.880000_g51670_i0 PRJEB81327 52278 248 0.88 2.1824 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 130 1.01e-25   NTclustered gi|1620182152|ref|XM_028684617.1| 880535 g51670 i0 79.888 6.77822580645161 179 35 72 1 1 178 400 222 Plasmodium sp. gorilla clade G2 calmodulin (PADL01_1434200), partial mRNA blastn 1681 130 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
21816837 21816837 PRJEB81327_P_NODE_57118_length_245_cov_1.215116_g56510_i0 PRJEB81327 57118 245 1.215116 2.9770342 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 121 5.98e-23   NTclustered gi|1620112010|ref|XM_028670755.1| 5849 g56510 i0 91.86 5.71428571428571 86 7 35 0 1 86 299 384 Plasmodium gallinaceum 60S ribosomal protein L11a, putative (PGAL8A_00082800), partial mRNA blastn 1400 121 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
23091990 23091990 PRJEB81327_P_NODE_55239_length_246_cov_1.341040_g54631_i0 PRJEB81327 55239 246 1.34104 3.2989584 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.33e-4   NTclustered gi|2795629872|ref|XM_068068966.1| 483139 g54631 i0 100 0.833333333333333 32 0 13 0 27 58 1158 1127 Cystoisospora suis uncharacterized protein (CSUI_008844), mRNA blastn 205 60.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
24365917 24365917 PRJEB81327_P_NODE_5680_length_605_cov_2.466165_g5099_i0 PRJEB81327 5680 605 2.466165 14.92029825 Cryptosporidium sp. chipmunk genotype I 1280935 SAR_Eukaryotes SAR_Eukaryotes 250 1.98e-61   NTclustered gi|2787704165|ref|XM_067344148.1| 1280935 g5099 i0 80.48 74.0462809917355 333 59 55 6 226 555 330 1 Cryptosporidium sp. chipmunk genotype I 60S ribosomal L40 (ELE39_001109), partial mRNA blastn 44798 250 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp. chipmunk genotype I

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;