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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJEB81327" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 17 ✖

bioproject 1

  • PRJEB81327 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2690208 2690208 PRJEB81327_P_NODE_59883_length_244_cov_0.900585_g59275_i0 PRJEB81327 59883 244 0.900585 2.1974274 Bracteacoccus minor 50037 Plants Plants 444 3.11e-120   NTclustered gi|674840682|ref|NC_024756.1| 50037 g59275 i0 99.588 1.99590163934426 243 1 99 0 1 243 1285 1527 Bracteacoccus minor strain UTEX B66 mitochondrion, complete genome blastn 487 444 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
3547767 3547767 PRJEB81327_P_NODE_59743_length_244_cov_0.900585_g59135_i0 PRJEB81327 59743 244 0.900585 2.1974274 Ulva 3118 Plants Plants 305 1.53e-78   NTclustered gi|1001185347|gb|KU161104.1| 3117 g59135 i0 90.87 45.1270491803279 230 18 94 3 7 235 9868 10095 Ulva prolifera mitochondrion, complete genome blastn 11011 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva prolifera
3966374 3966374 PRJEB81327_P_NODE_7744_length_503_cov_1.788372_g7139_i0 PRJEB81327 7744 503 1.788372 8.99551116 Bracteacoccus minor 50037 Plants Plants 843 0   NTclustered gi|674840682|ref|NC_024756.1| 50037 g7139 i0 98.734 39.1431411530815 474 6 100 0 30 503 11183 11656 Bracteacoccus minor strain UTEX B66 mitochondrion, complete genome blastn 19689 843 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
6517718 6517718 PRJEB81327_P_NODE_12626_length_380_cov_33.198697_g12018_i0 PRJEB81327 12626 380 33.198697 126.1550486 Pediastrum duplex 3105 Plants Plants 370 8.8e-98   NTclustered gi|21040380|gb|AF183479.2| 3105 g12018 i0 93.227 91.7921052631579 251 17 90 0 1 251 2889 3139 Pediastrum duplex strain UTEX LB 1364 28S ribosomal RNA gene, partial sequence blastn 34881 370 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Pediastrum Pediastrum duplex
6518465 6518465 PRJEB81327_P_NODE_8146_length_488_cov_1.419277_g7539_i0 PRJEB81327 8146 488 1.419277 6.92607176 Bracteacoccus minor 50037 Plants Plants 891 0   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g7539 i0 99.59 88.7991803278689 488 2 100 0 1 488 36672 37159 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 43334 891 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
10343225 10343225 PRJEB81327_P_NODE_689_length_1696_cov_6.879236_g493_i0 PRJEB81327 689 1696 6.879236 116.67184256 Bracteacoccus minor 50037 Plants Plants 3112 0   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g493 i0 99.823 142.526533018868 1694 3 99 0 1 1694 2875 1182 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 241725 3112 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
11618099 11618099 PRJEB81327_P_NODE_13330_length_370_cov_1.377104_g12722_i0 PRJEB81327 13330 370 1.377104 5.0952848 Polytomella parva 51329 Plants Plants 235 3.25e-57   NTclustered gi|1861356367|gb|MT377411.1| 51329 g12722 i0 78.284 22.4837837837838 373 75 100 5 1 370 653 284 Polytomella parva clone 0016300147 40S ribosomal protein S2 (RPS2) mRNA, complete cds; plastid blastn 8319 235 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella parva
14168018 14168018 PRJEB81327_P_NODE_20352_length_308_cov_1.310638_g19744_i0 PRJEB81327 20352 308 1.310638 4.03676504 Bracteacoccus minor 50037 Plants Plants 569 6.419999999999998e-158   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g19744 i0 100 119.902597402597 308 0 100 0 1 308 7693 8000 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 36930 569 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
15024737 15024737 PRJEB81327_P_NODE_20652_length_305_cov_16.008621_g20044_i0 PRJEB81327 20652 305 16.008621 48.82629405 Bracteacoccus 50036 Plants Plants 564 2.95e-156   NTclustered gi|1914023927|gb|MW075319.1| 50037 g20044 i0 100 100.003278688525 305 0 100 0 1 305 67 371 Bracteacoccus minor strain SAG 221-1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30501 564 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
15442089 15442089 PRJEB81327_P_NODE_16893_length_328_cov_3.337255_g16285_i0 PRJEB81327 16893 328 3.337255 10.9461964 Bracteacoccus minor 50037 Plants Plants 579 1.1399999999999999e-160   NTclustered gi|674840682|ref|NC_024756.1| 50037 g16285 i0 98.476 10.8262195121951 328 5 100 0 1 328 29856 30183 Bracteacoccus minor strain UTEX B66 mitochondrion, complete genome blastn 3551 579 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
15442600 15442600 PRJEB81327_P_NODE_56013_length_246_cov_0.890173_g55405_i0 PRJEB81327 56013 246 0.890173 2.18982558 Bracteacoccus minor 50037 Plants Plants 351 1.96e-92   NTclustered gi|674840682|ref|NC_024756.1| 50037 g55405 i0 98.98 1.79674796747967 196 2 80 0 1 196 44008 43813 Bracteacoccus minor strain UTEX B66 mitochondrion, complete genome blastn 442 351 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
17575189 17575189 PRJEB81327_P_NODE_7414_length_516_cov_16.029345_g6810_i0 PRJEB81327 7414 516 16.029345 82.7114202 Bracteacoccus 50036 Plants Plants 948 0   NTclustered gi|1914023927|gb|MW075319.1| 50037 g6810 i0 99.806 99.9941860465116 516 1 100 0 1 516 576 1091 Bracteacoccus minor strain SAG 221-1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 51597 948 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
17991241 17991241 PRJEB81327_P_NODE_26475_length_285_cov_1.146226_g25867_i0 PRJEB81327 26475 285 1.146226 3.2667441 Coccomyxa subellipsoidea 248742 Plants Plants 161 4.19e-35   NTclustered gi|545376366|ref|XM_005652223.1| 574566 g25867 i0 84.431 14.2175438596491 167 22 58 3 1 165 301 465 Coccomyxa subellipsoidea C-169 60S ribosomal protein L18a-2 partial mRNA blastn 4052 161 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
19265365 19265365 PRJEB81327_P_NODE_3636_length_793_cov_15.093056_g3102_i0 PRJEB81327 3636 793 15.093056 119.68793408 Bracteacoccus minor 50037 Plants Plants 1465 0   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g3102 i0 100 147.504413619168 793 0 100 0 1 793 2908 3700 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 116971 1465 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
20540772 20540772 PRJEB81327_P_NODE_36157_length_267_cov_16.149485_g35549_i0 PRJEB81327 36157 267 16.149485 43.11912495 Bracteacoccus minor 50037 Plants Plants 494 3.38e-135   NTclustered gi|1008861662|ref|NC_029674.1| 50037 g35549 i0 100 132.85393258427 267 0 100 0 1 267 3967 4233 Bracteacoccus minor strain UTEX 66 chloroplast, complete genome blastn 35472 494 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus minor
21399342 21399342 PRJEB81327_P_NODE_67717_length_230_cov_3.878981_g67109_i0 PRJEB81327 67717 230 3.878981 8.9216563 root 1 Root_unresolved Root_unresolved 425 1.05e-114   NTclustered gi|1714003650|gb|MN243923.1| 3079 g67109 i0 100 100.147826086957 230 0 100 0 1 230 619 848 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 23034 425 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
22673780 22673780 PRJEB81327_P_NODE_26358_length_285_cov_1.367925_g25750_i0 PRJEB81327 26358 285 1.367925 3.89858625 Chlamydomonadaceae 3051 Plants Plants 392 1.3699999999999999e-104   NTclustered gi|1867187245|gb|MT735194.1| 179866 g25750 i0 92.419 97.8035087719298 277 17 97 3 9 285 2398 2670 Heterochlamydomonas inaequalis strain LC006-34-2-2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27874 392 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Heterochlamydomonas Heterochlamydomonas inaequalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;