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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJEB81327" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 22 ✖

bioproject 1

  • PRJEB81327 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
139501 139501 PRJEB81327_P_NODE_11101_length_408_cov_5.232836_g10493_i0 PRJEB81327 11101 408 5.232836 21.34997088 Physarum polycephalum 5791 Evosea other_Eukaryota 497 4.19e-136   NTclustered gi|3221|emb|V01159.1| 5791 g10493 i0 88.862 55.8455882352941 413 34 99 10 1 405 1531 1939 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 22785 497 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
139779 139779 PRJEB81327_P_NODE_33701_length_272_cov_1.155779_g33093_i0 PRJEB81327 33701 272 1.155779 3.14371888 Stemonitopsis subcaespitosa 1048528 Evosea other_Eukaryota 370 6.07e-98   NTclustered gi|426281760|gb|JX681133.1| 1048528 g33093 i0 91.176 98.7352941176471 272 24 100 0 1 272 284 13 Stemonitopsis subcaespitosa actin gene, partial cds blastn 26856 370 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitopsis Stemonitopsis subcaespitosa
140097 140097 PRJEB81327_P_NODE_57021_length_245_cov_1.476744_g56413_i0 PRJEB81327 57021 245 1.476744 3.6180228 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 368 1.93e-97   NTclustered gi|300078498|gb|GU001160.1| 5755 g56413 i0 93.927 3.58367346938775 247 10 100 4 1 245 6398 6155 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 878 368 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
140261 140261 PRJEB81327_P_NODE_8781_length_468_cov_1.455696_g8173_i0 PRJEB81327 8781 468 1.455696 6.81265728 Dictyostelium discoideum 44689 Evosea other_Eukaryota 257 8.980000000000001e-64   NTclustered gi|167938|gb|M23749.1|DDIUBIQB 44689 g8173 i0 79.177 68.8076923076923 389 68 82 11 36 420 389 10 D.discoideum ubiquitin mRNA, complete cds, clone DCUBV45 blastn 32202 257 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
2271931 2271931 PRJEB81327_P_NODE_17262_length_325_cov_1.436508_g16654_i0 PRJEB81327 17262 325 1.436508 4.668651 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.031   NTclustered gi|2104813|emb|Y13119.1| 44689 g16654 i0 100 0.344615384615385 28 0 9 0 39 66 2037 2010 Dictyostelium discoideum mRNA for CudA protein blastn 112 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
2689930 2689930 PRJEB81327_P_NODE_38523_length_263_cov_3.178947_g37915_i0 PRJEB81327 38523 263 3.178947 8.36063061 Platyamoeba sp. COHH 7 943227 Discosea other_Eukaryota 399 7.439999999999999e-107   NTclustered gi|319659362|gb|GU320599.1| 943227 g37915 i0 93.962 102.212927756654 265 14 100 2 1 263 391 127 Platyamoeba sp. COHH 7 18S ribosomal RNA gene, partial sequence blastn 26882 399 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. COHH 7
2690309 2690309 PRJEB81327_P_NODE_67403_length_232_cov_2.591195_g66795_i0 PRJEB81327 67403 232 2.591195 6.0115724 Dictyostelium purpureum 5786 Evosea other_Eukaryota 182 2.54e-41   NTclustered gi|330801204|ref|XM_003288572.1| 5786 g66795 i0 81.498 4.20689655172414 227 36 97 5 6 229 214 437 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_92126), mRNA blastn 976 182 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
3547390 3547390 PRJEB81327_P_NODE_1903_length_1110_cov_3.743491_g1517_i0 PRJEB81327 1903 1110 3.743491 41.5527501 Vexillifera 218659 Root_unresolved Root_unresolved 320 2.799999999999999e-82   NTclustered gi|221185864|gb|FJ577811.1| 590481 g1517 i0 86.897 16.2405405405405 290 33 26 5 825 1110 1837 1549 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 18027 320 1 Eukaryota Amoebozoa             uncultured Amoebozoa
4824880 4824880 PRJEB81327_P_NODE_1924_length_1106_cov_2.766699_g1534_i0 PRJEB81327 1924 1106 2.766699 30.59969094 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 787 0   NTclustered gi|511083902|dbj|AK419160.1| 5759 g1534 i0 80.633 94.246835443038 1043 180 93 20 7 1038 1060 29 Entamoeba histolytica cDNA clone: Xeh-003B20, actin, complete cds, strain: HM-1:IMSS blastn 104237 787 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
5242138 5242138 PRJEB81327_P_NODE_10985_length_411_cov_1.571006_g10377_i0 PRJEB81327 10985 411 1.571006 6.45683466 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 113 1.79e-20   NTclustered gi|511487963|gb|JX898537.1| 1260765 g10377 i0 88.298 11.6715328467153 94 11 23 0 29 122 362 269 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 4797 113 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
6518474 6518474 PRJEB81327_P_NODE_9266_length_453_cov_2.136842_g8658_i0 PRJEB81327 9266 453 2.136842 9.67989426 Entamoeba dispar 46681 Evosea other_Eukaryota 154 1.17e-32   NTclustered gi|167389105|ref|XM_001738768.1| 370354 g8658 i0 78.8 1.45695364238411 250 38 53 12 212 453 246 4 Entamoeba dispar SAW760 40S ribosomal protein S17-A, putative (EDI_100200), partial mRNA blastn 660 154 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
8649960 8649960 PRJEB81327_P_NODE_17047_length_327_cov_1.606299_g16439_i0 PRJEB81327 17047 327 1.606299 5.25259773 Dictyostelium 5782 Evosea other_Eukaryota 313 1.28e-80   NTclustered gi|7274|emb|X55973.1| 44689 g16439 i0 84.049 97.7981651376147 326 50 99 2 1 325 802 478 D. discoideum EF1-I gene for elongation factor 1 alpha blastn 31980 313 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
9067096 9067096 PRJEB81327_P_NODE_33068_length_273_cov_1.310000_g32460_i0 PRJEB81327 33068 273 1.31 3.5763 Tubulinea group 04 sp. MSED2 1215997 Tubulinea other_Eukaryota 494 3.46e-135   NTclustered gi|399764277|gb|JQ271788.1| 1215997 g32460 i0 99.267 51.5054945054945 273 2 100 0 1 273 537 809 Tubulinea group 04 sp. MSED2 18S ribosomal RNA gene, partial sequence blastn 14061 494 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. MSED2
9067172 9067172 PRJEB81327_P_NODE_39788_length_261_cov_2.909574_g39180_i0 PRJEB81327 39788 261 2.909574 7.59398814 Cavenderia fasciculata 261658 Evosea other_Eukaryota 243 1.3200000000000001e-59   NTclustered gi|470239206|ref|XM_004351317.1| 261658 g39180 i0 88.889 25.6130268199234 198 20 75 2 3 199 197 1 Cavenderia fasciculata Rho GTPase (rac1A), partial mRNA blastn 6685 243 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
15442290 15442290 PRJEB81327_P_NODE_32593_length_274_cov_1.174129_g31985_i0 PRJEB81327 32593 274 1.174129 3.21711346 Arcyria sp. 'tenuissima' 3129282 Evosea other_Eukaryota 392 1.3099999999999999e-104   NTclustered gi|2698738389|gb|PP491458.1| 3129282 g31985 i0 92.419 1.01094890510949 277 17 99 2 1 273 3573 3849 Arcyria sp. 'tenuissima' voucher sc32644 internal transcribed spacer region, partial sequence blastn 277 392 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria sp. 'tenuissima'
15442678 15442678 PRJEB81327_P_NODE_62813_length_242_cov_0.911243_g62205_i0 PRJEB81327 62813 242 0.911243 2.20520806 Echinostelium minutum 300235 Evosea other_Eukaryota 281 2.55e-71   NTclustered gi|210062522|gb|AY842034.2| 300235 g62205 i0 88.115 2.02066115702479 244 19 99 10 4 242 1003 1241 Echinostelium minutum strain ATCC 22345 18S ribosomal RNA gene, partial sequence blastn 489 281 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium minutum
15442774 15442774 PRJEB81327_P_NODE_8813_length_467_cov_0.977157_g8205_i0 PRJEB81327 8813 467 0.977157 4.56332319 Amoebozoa sp. 1892891 Root_unresolved Root_unresolved 497 4.85e-136   NTclustered gi|2651357789|gb|PP174304.1| 1892891 g8205 i0 86.17 11.8201284796574 470 53 100 11 1 467 4052 3592 Amoebozoa sp. isolate 114_WLI small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5520 497 1 Eukaryota Amoebozoa             Amoebozoa sp.
16716340 16716340 PRJEB81327_P_NODE_18254_length_316_cov_1.880658_g17646_i0 PRJEB81327 18254 316 1.880658 5.94287928 Arcyria sp. 'tenuissima' 3129282 Evosea other_Eukaryota 307 5.720000000000001e-79   NTclustered gi|2698738389|gb|PP491458.1| 3129282 g17646 i0 84.444 35.1835443037975 315 46 99 2 3 316 1030 718 Arcyria sp. 'tenuissima' voucher sc32644 internal transcribed spacer region, partial sequence blastn 11118 307 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria sp. 'tenuissima'
20540509 20540509 PRJEB81327_P_NODE_14817_length_350_cov_1.111913_g14209_i0 PRJEB81327 14817 350 1.111913 3.8916955 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 538 2.0799999999999993e-148   NTclustered gi|300078498|gb|GU001160.1| 5755 g14209 i0 94.382 17.4742857142857 356 10 100 8 1 350 5897 5546 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6116 538 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20540724 20540724 PRJEB81327_P_NODE_31737_length_275_cov_1.524752_g31129_i0 PRJEB81327 31737 275 1.524752 4.193068 Physarum albescens 289948 Evosea other_Eukaryota 473 4.55e-129   NTclustered gi|381139256|emb|HE655073.1| 289948 g31129 i0 97.818 46.0654545454545 275 4 100 1 1 275 1059 1331 Physarum albescens partial 28S rRNA gene, isolate Fr-K2 blastn 12668 473 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum albescens
21816855 21816855 PRJEB81327_P_NODE_58178_length_245_cov_0.895349_g57570_i0 PRJEB81327 58178 245 0.895349 2.19360505 Heterostelium album 2086695 Evosea other_Eukaryota 156 1.64e-33   NTclustered gi|1160571874|ref|XM_020575431.1| 670386 g57570 i0 85.43 4.17551020408163 151 20 61 2 47 196 257 108 Polysphondylium pallidum PN500 S60 ribosomal protein L36a (rpl36a), partial mRNA blastn 1023 156 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
24365998 24365998 PRJEB81327_P_NODE_6340_length_566_cov_1.405680_g5749_i0 PRJEB81327 6340 566 1.40568 7.9561488 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 880 0   NTclustered gi|221185864|gb|FJ577811.1| 590481 g5749 i0 94.728 65.9416961130742 569 24 99 4 3 566 574 7 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 37323 880 1 Eukaryota Amoebozoa             uncultured Amoebozoa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;