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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB81171" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB81171 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
139399 139399 PRJEB81171_P_NODE_5561_length_286_cov_1.098592_g5434_i0 PRJEB81171 5561 286 1.098592 3.14197312 Batrachochytrium dendrobatidis 109871 Fungi Fungi 52.8 0.026   NTclustered gi|2897840458|gb|CP161934.1| 109871 g5434 i0 100 0.293706293706294 28 0 10 0 106 133 166385 166358 Batrachochytrium dendrobatidis strain JEL423 chromosome 12 blastn 84 52.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
7374193 7374193 PRJEB81171_P_NODE_6426_length_272_cov_2.035176_g6299_i0 PRJEB81171 6426 272 2.035176 5.53567872 Fungi 4751 Fungi Fungi 121 6.749999999999999e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g6299 i0 84.252 9.77573529411765 127 16 46 3 141 265 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2659 122 0.991803278688525 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
7791700 7791700 PRJEB81171_P_NODE_5827_length_281_cov_1.500000_g5700_i0 PRJEB81171 5827 281 1.5 4.215 Polychytrium aggregatum 110093 Fungi Fungi 265 3.06e-66   NTclustered gi|2432147654|ref|XM_053111044.1| 110093 g5700 i0 83.688 89.5053380782918 282 44 100 2 1 281 1450 1170 Polychytrium aggregatum Enolase, C-terminal TIM barrel domain-containing protein (BJ171DRAFT_505639), mRNA blastn 25151 265 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
10342504 10342504 PRJEB81171_P_NODE_8449_length_249_cov_1.329545_g8322_i0 PRJEB81171 8449 249 1.329545 3.31056705 Polychytrium aggregatum 110093 Fungi Fungi 263 9.56e-66   NTclustered gi|2432132579|ref|XM_053106383.1| 110093 g8322 i0 86.864 91.3172690763052 236 29 94 2 15 249 1677 1443 Polychytrium aggregatum heat shock protein 70 family (BJ171DRAFT_212372), mRNA blastn 22738 263 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
11617940 11617940 PRJEB81171_P_NODE_4170_length_324_cov_2.119522_g4043_i0 PRJEB81171 4170 324 2.119522 6.86725128 Polychytrium aggregatum 110093 Fungi Fungi 411 4.359999999999999e-110   NTclustered gi|2432171462|ref|XM_053112561.1| 110093 g4043 i0 89.571 99.8827160493827 326 30 100 4 1 324 1304 981 Polychytrium aggregatum heat shock protein 90 kDa (BJ171DRAFT_524257), mRNA blastn 32362 411 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
16716077 16716077 PRJEB81171_P_NODE_1654_length_513_cov_1.063636_g1531_i0 PRJEB81171 1654 513 1.063636 5.45645268 Polychytrium aggregatum 110093 Fungi Fungi 503 1.15e-137   NTclustered gi|2432145256|ref|XM_053110808.1| 110093 g1531 i0 84.783 99.4054580896686 506 71 98 5 1 503 1577 1075 Polychytrium aggregatum hsp71-like protein (BJ171DRAFT_502900), mRNA blastn 50995 503 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
21816073 21816073 PRJEB81171_P_NODE_2078_length_459_cov_2.575130_g1953_i0 PRJEB81171 2078 459 2.57513 11.8198467 Polychytrium aggregatum 110093 Fungi Fungi 143 2.57e-29   NTclustered gi|2432158676|ref|XM_053113190.1| 110093 g1953 i0 79.512 21.3747276688453 205 38 44 4 39 241 74 276 Polychytrium aggregatum ribosomal protein S25 component of cytosolic 80S ribosome and 40S small subunit (BJ171DRAFT_559057), partial mRNA blastn 9811 143 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23091302 23091302 PRJEB81171_P_NODE_1459_length_548_cov_3.381053_g1337_i0 PRJEB81171 1459 548 3.381053 18.52817044 Polychytrium aggregatum 110093 Fungi Fungi 189 3.94e-43   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g1337 i0 75.81 31.5310218978102 401 81 72 12 109 504 523 134 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 17279 189 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;