RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB81171" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 3 ✖

bioproject 1

  • PRJEB81171 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
139300 139300 PRJEB81171_P_NODE_1721_length_505_cov_1.439815_g1598_i0 PRJEB81171 1721 505 1.439815 7.27106575 Thecamonas trahens 529818 Root_unresolved Root_unresolved 359 2.6e-94   NTclustered gi|923133140|ref|XM_013904582.1| 461836 g1598 i0 79.837 63.4752475247525 491 99 97 0 15 505 494 4 Thecamonas trahens ATCC 50062 Ras-like protein rasG (AMSG_03185), partial mRNA blastn 32055 359 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5242013 5242013 PRJEB81171_P_NODE_4845_length_302_cov_2.497817_g4718_i0 PRJEB81171 4845 302 2.497817 7.54340734 Thecamonas trahens 529818 Root_unresolved Root_unresolved 117 9.83e-22   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g4718 i0 79.348 1.74503311258278 184 24 58 10 129 302 200 379 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 527 117 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14167806 14167806 PRJEB81171_P_NODE_5132_length_293_cov_1.931818_g5005_i0 PRJEB81171 5132 293 1.931818 5.66022674 Thecamonas trahens 529818 Root_unresolved Root_unresolved 141 5.64e-29   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g5005 i0 79.343 10.8259385665529 213 35 73 3 81 293 844 641 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 3172 141 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;