contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJEB80557" and tax_phylum = "Thermotogota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3965205 | 3965205 | PRJEB80557_S_NODE_19264_length_216_cov_1.550898_g18868_i0 | PRJEB80557 | 19264 | 216 | 1.550898 | 3.34993968 | Fervidobacterium gondwanense | 44754 | Bacteria | Bacteria | 351 | 1.68e-92 | NTclustered | gi|2793119032|gb|CP126501.1| | 44754 | g18868 | i0 | 98.492 | 13.8611111111111 | 199 | 3 | 92 | 0 | 1 | 199 | 1154363 | 1154561 | Fervidobacterium gondwanense strain CBS-13020 chromosome, complete genome | blastn | 2994 | 351 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium gondwanense | ||
| 4824621 | 4824621 | PRJEB80557_S_NODE_29944_length_177_cov_1.210938_g29548_i0 | PRJEB80557 | 29944 | 177 | 1.210938 | 2.14336026 | Fervidobacterium | 2422 | Bacteria | Bacteria | 307 | 2.89e-79 | NTclustered | gi|2793125101|gb|CP126499.1| | 2423 | g29548 | i0 | 98.837 | 2.91525423728814 | 172 | 2 | 97 | 0 | 1 | 172 | 2069885 | 2069714 | Fervidobacterium islandicum strain H-21 chromosome, complete genome | blastn | 516 | 307 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium islandicum | ||
| 8649740 | 8649740 | PRJEB80557_S_NODE_3087_length_461_cov_1.978155_g2692_i0 | PRJEB80557 | 3087 | 461 | 1.978155 | 9.11929455 | Bacteria | 2 | Bacteria | Bacteria | 691 | 0 | NTclustered | gi|2793119032|gb|CP126501.1| | 44754 | g2692 | i0 | 97.297 | 62.9240780911063 | 407 | 11 | 88 | 0 | 1 | 407 | 521673 | 521267 | Fervidobacterium gondwanense strain CBS-13020 chromosome, complete genome | blastn | 29008 | 693 | 0.997113997113997 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium gondwanense | ||
| 13749916 | 13749916 | PRJEB80557_S_NODE_17891_length_223_cov_2.229885_g17495_i0 | PRJEB80557 | 17891 | 223 | 2.229885 | 4.97264355 | Fervidobacterium | 2422 | Bacteria | Bacteria | 331 | 2.2700000000000002e-86 | NTclustered | gi|2216421086|gb|CP014334.2| | 2423 | g17495 | i0 | 96.535 | 31.8654708520179 | 202 | 4 | 90 | 3 | 1 | 200 | 304758 | 304958 | Fervidobacterium islandicum strain AW-1 chromosome, complete genome | blastn | 7106 | 331 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium islandicum | ||
| 15024431 | 15024431 | PRJEB80557_S_NODE_23872_length_196_cov_1.408163_g23476_i0 | PRJEB80557 | 23872 | 196 | 1.408163 | 2.75999948 | Bacteria | 2 | Bacteria | Bacteria | 357 | 3.2099999999999996e-94 | NTclustered | gi|383108560|gb|CP003260.1| | 771875 | g23476 | i0 | 99.49 | 11 | 196 | 1 | 100 | 0 | 1 | 196 | 787326 | 787131 | Fervidobacterium pennivorans DSM 9078, complete genome | blastn | 2156 | 357 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium pennivorans | ||
| 15024462 | 15024462 | PRJEB80557_S_NODE_3252_length_452_cov_1.637717_g2857_i0 | PRJEB80557 | 3252 | 452 | 1.637717 | 7.40248084 | Bacteria | 2 | Bacteria | Bacteria | 739 | 0 | NTclustered | gi|2216421086|gb|CP014334.2| | 2423 | g2857 | i0 | 97.279 | 30.7610619469027 | 441 | 2 | 95 | 2 | 22 | 452 | 305648 | 305208 | Fervidobacterium islandicum strain AW-1 chromosome, complete genome | blastn | 13904 | 739 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium islandicum | ||
| 16715974 | 16715974 | PRJEB80557_S_NODE_7554_length_325_cov_1.840580_g7158_i0 | PRJEB80557 | 7554 | 325 | 1.84058 | 5.981885 | Defluviitoga tunisiensis | 1006576 | Bacteria | Bacteria | 499 | 9.07e-137 | NTclustered | gi|762219508|emb|LN824141.1| | 1006576 | g7158 | i0 | 98.246 | 21.0461538461538 | 285 | 5 | 88 | 0 | 23 | 307 | 1218006 | 1217722 | Defluviitoga tunisiensis genome assembly DTL3, chromosome : I | blastn | 6840 | 499 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Petrotogales | Petrotogaceae | Defluviitoga | Defluviitoga tunisiensis | ||
| 20123056 | 20123056 | PRJEB80557_S_NODE_27476_length_184_cov_1.770370_g27080_i0 | PRJEB80557 | 27476 | 184 | 1.77037 | 3.2574808 | Bacteria | 2 | Bacteria | Bacteria | 281 | 1.84e-71 | NTclustered | gi|383108560|gb|CP003260.1| | 771875 | g27080 | i0 | 98.148 | 10.3695652173913 | 162 | 2 | 88 | 1 | 23 | 184 | 782443 | 782603 | Fervidobacterium pennivorans DSM 9078, complete genome | blastn | 1908 | 281 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium pennivorans |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;