RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB80557" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB80557 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16715764 16715764 PRJEB80557_S_NODE_19074_length_217_cov_1.535714_g18678_i0 PRJEB80557 19074 217 1.535714 3.33249938 Aquisphaera giovannonii 406548 Bacteria Bacteria 307 3.7e-79   NTclustered gi|1730068067|gb|CP042997.1| 406548 g18678 i0 92.202 142.861751152074 218 15 100 2 1 217 9143890 9143674 Aquisphaera giovannonii strain OJF2 chromosome, complete genome blastn 31001 307 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Aquisphaera Aquisphaera giovannonii
20540126 20540126 PRJEB80557_S_NODE_36497_length_163_cov_1.333333_g36101_i0 PRJEB80557 36497 163 1.333333 2.17333279 Isosphaeraceae bacterium EP7 3139350 Bacteria Bacteria 207 2.74e-49   NTclustered gi|2719878338|gb|CP151667.1| 3139350 g36101 i0 90.625 14.4601226993865 160 10 96 4 1 157 1599306 1599149 Isosphaeraceae bacterium EP7 chromosome, complete genome blastn 2357 207 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae   Isosphaeraceae bacterium EP7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;