RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB80557" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB80557 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5241863 5241863 PRJEB80557_S_NODE_9045_length_302_cov_1.367589_g8649_i0 PRJEB80557 9045 302 1.367589 4.13011878 Anaeromyxobacter paludicola 2918171 Bacteria Bacteria 414 3.11e-111   NTclustered gi|2199271117|dbj|AP025592.1| 2918171 g8649 i0 93.238 212.94701986755 281 19 93 0 1 281 1383143 1383423 Anaeromyxobacter paludicola DNA, complete genome blastn 64310 414 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter paludicola
7374078 7374078 PRJEB80557_S_NODE_24526_length_194_cov_1.075862_g24130_i0 PRJEB80557 24526 194 1.075862 2.08717228 Myxococcus 32 Bacteria Bacteria 298 1.95e-76   NTclustered gi|2869653495|gb|CP175551.1| 33 g24130 i0 97.159 2.72164948453608 176 5 91 0 19 194 5282724 5282549 Myxococcus fulvus strain KYC1117 chromosome, complete genome blastn 528 298 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus fulvus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;