RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB80557" and tax_kingdom = "Helvetiavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Helvetiavirae · 2 ✖

bioproject 1

  • PRJEB80557 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14167356 14167356 PRJEB80557_S_NODE_10572_length_282_cov_1.768240_g10176_i0 PRJEB80557 10572 282 1.76824 4.9864368 Hukuchivirus IN93 2844981 Viruses Viruses 396 1.04e-105   NTclustered gi|227215235|dbj|AB063393.2| 1714273 g10176 i0 92.754 1.95744680851064 276 17 97 2 10 282 12819 13094 Thermus thermophilus phage IN93 DNA, complete genome blastn 552 396 1 Viruses   Helvetiavirae Dividoviricota Laserviricetes Halopanivirales Matsushitaviridae Hukuchivirus Hukuchivirus IN93
16715716 16715716 PRJEB80557_S_NODE_14054_length_249_cov_1.195000_g13658_i0 PRJEB80557 14054 249 1.195 2.97555 Hukuchivirus IN93 2844981 Viruses Viruses 359 1.19e-94   NTclustered gi|227215235|dbj|AB063393.2| 1714273 g13658 i0 94.444 1.87951807228916 234 12 94 1 1 233 12077 12310 Thermus thermophilus phage IN93 DNA, complete genome blastn 468 359 1 Viruses   Helvetiavirae Dividoviricota Laserviricetes Halopanivirales Matsushitaviridae Hukuchivirus Hukuchivirus IN93

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;