RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB80557" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJEB80557 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18848303 18848303 PRJEB80557_S_NODE_4455_length_402_cov_1.348442_g4059_i0 PRJEB80557 4455 402 1.348442 5.42073684 root 1 Root_unresolved Root_unresolved 737 0   NTclustered gi|2648012127|gb|PP068615.1| 10515 g4059 i0 99.751 100 402 1 100 0 1 402 13650 13249 Human adenovirus 2 isolate HAdV-C2/USA/5R6/2010, complete genome blastn 40200 743 0.991924629878869 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
19264758 19264758 PRJEB80557_S_NODE_6456_length_346_cov_9.124579_g6060_i0 PRJEB80557 6456 346 9.124579 31.57104334 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.033   NTclustered gi|9964314|ref|NC_002520.1| 28321 g6060 i0 94.286 0.101156069364162 35 1 10 1 211 244 153509 153475 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
25222767 25222767 PRJEB80557_S_NODE_9580_length_294_cov_2.522449_g9184_i0 PRJEB80557 9580 294 2.522449 7.41600006 root 1 Root_unresolved Root_unresolved 544 3.69e-150   NTclustered gi|2288721861|gb|OP218818.1| 10535 g9184 i0 100 100 294 0 100 0 1 294 13777 14070 Unidentified adenovirus strain CHOP Ad5 blastn 29400 544 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;