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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJEB7799" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 16 ✖

tax_clade 1

bioproject 1

  • PRJEB7799 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25528235 25528235 PRJEB7799m_S_NODE_977_length_198_cov_2.453988_g972_i0 PRJEB7799 977 198 2.453988 4.85889624 Vannella septentrionalis 197531 Discosea other_Eukaryota 58.4 3.69e-4   NTclustered gi|300078499|gb|GU001161.1| 197531 g972 i0 97.059 2.10606060606061 34 1 17 0 155 188 1240 1207 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 417 58.4 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
25528509 25528509 PRJEB7799n_S_NODE_8545_length_173_cov_2.913043_g8508_i0 PRJEB7799 8545 173 2.913043 5.03956439 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 309 7.81e-80   NTclustered gi|659103926|gb|KJ569726.1| 1512276 g8508 i0 99.412 44.2601156069364 170 1 98 0 1 170 409 240 Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence blastn 7657 309 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
25616766 25616766 PRJEB7799f_S_NODE_1345_length_226_cov_8.272251_g1329_i0 PRJEB7799 1345 226 8.272251 18.69528726 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 418 1.7199999999999998e-112   NTclustered gi|909719646|gb|KT185626.1| 5755 g1329 i0 100 47.9026548672566 226 0 100 0 1 226 3640 3865 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10826 418 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25617004 25617004 PRJEB7799l_S_NODE_13377_length_155_cov_6.291667_g13348_i0 PRJEB7799 13377 155 6.291667 9.75208385 Paramoebidae 200887 Discosea other_Eukaryota 71.3 3.52e-8   NTclustered gi|30313812|gb|AY193724.1| 227437 g13348 i0 100 26.541935483871 38 0 25 0 1 38 597 634 Neoparamoeba sp. strain AFSM3 small subunit ribosomal RNA gene, complete sequence blastn 4114 71.3 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Neoparamoeba Neoparamoeba sp. strain AFSM3
26025245 26025245 PRJEB7799j_S_NODE_4132_length_164_cov_2.984496_g4127_i0 PRJEB7799 4132 164 2.984496 4.89457344 Vannellidae 95227 Discosea other_Eukaryota 134 4.75e-27   NTclustered gi|1269228442|gb|MF683567.1| 2047823 g4127 i0 90.385 61.8109756097561 104 6 61 4 12 111 187 84 Ripella tribonemae clone 70.1.1 18S ribosomal RNA gene, partial sequence blastn 10137 134 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
26071393 26071393 PRJEB7799f_S_NODE_7133_length_153_cov_2.627119_g7117_i0 PRJEB7799 7133 153 2.627119 4.01949207 Vannella sp. LITHOV 1215650 Discosea other_Eukaryota 272 8.84e-69   NTclustered gi|399764235|gb|JQ271746.1| 1215650 g7117 i0 98.693 97.1372549019608 153 2 100 0 1 153 394 242 Vannella sp. LITHOV 18S ribosomal RNA gene, partial sequence blastn 14862 272 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. LITHOV
26072615 26072615 PRJEB7799n_S_NODE_2517_length_273_cov_3.684874_g2480_i0 PRJEB7799 2517 273 3.684874 10.05970602 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 472 1.62e-128   NTclustered gi|330902858|gb|JF298255.1| 1017091 g2480 i0 97.81 16.996336996337 274 5 100 1 1 273 738 1011 Cochliopodium larifeili clone 904 18S ribosomal RNA gene, partial sequence blastn 4640 472 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
26161418 26161418 PRJEB7799k_S_NODE_445_length_249_cov_7.177570_g439_i0 PRJEB7799 445 249 7.17757 17.8721493 Vermistella 354201 Discosea other_Eukaryota 97.1 1.03e-15   NTclustered gi|766943132|gb|KJ874207.1| 1628650 g439 i0 90.411 31.7309236947791 73 7 29 0 177 249 1522 1594 Vermistella sp. TT-2015a strain SV198 clone 1 18S ribosomal RNA gene, partial sequence blastn 7901 97.1 1 Eukaryota Amoebozoa   Discosea   Stygamoebida   Vermistella Vermistella arctica
26209373 26209373 PRJEB7799p_S_NODE_1310_length_365_cov_6.142424_g1287_i0 PRJEB7799 1310 365 6.142424 22.4198476 uncultured Vannellidae 544561 Discosea other_Eukaryota 209 1.94e-49   NTclustered gi|724028230|gb|KP099889.1| 544561 g1287 i0 77.929 37.5287671232877 367 60 99 18 1 362 832 482 Uncultured Vannellidae clone b18 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13698 209 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
26209397 26209397 PRJEB7799p_S_NODE_14526_length_178_cov_9.720280_g14503_i0 PRJEB7799 14526 178 9.72028 17.3020984 Cochliopodium actinophorum 703021 Discosea other_Eukaryota 298 1.75e-76   NTclustered gi|330902844|gb|JF298248.1| 703021 g14503 i0 100 83.1629213483146 161 0 90 0 1 161 442 282 Cochliopodium actinophorum clone 1206 18S ribosomal RNA gene, partial sequence blastn 14803 298 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium actinophorum
26297010 26297010 PRJEB7799f_S_NODE_6998_length_154_cov_62.621849_g6982_i0 PRJEB7799 6998 154 62.621849 96.43764746 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 147 5.639999999999999e-31   NTclustered gi|909719646|gb|KT185626.1| 5755 g6982 i0 100 38.1168831168831 79 0 86 0 76 154 2997 2919 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5870 147 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26345229 26345229 PRJEB7799p_S_NODE_1607_length_344_cov_2.828479_g1584_i0 PRJEB7799 1607 344 2.828479 9.72996776 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 510 4.469999999999998e-140   NTclustered gi|330902858|gb|JF298255.1| 1017091 g1584 i0 93.696 14.5755813953488 349 9 100 11 1 344 1016 676 Cochliopodium larifeili clone 904 18S ribosomal RNA gene, partial sequence blastn 5014 510 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
26433240 26433240 PRJEB7799j_S_NODE_191_length_280_cov_3.061224_g186_i0 PRJEB7799 191 280 3.061224 8.5714272 Vannellidae 95227 Discosea other_Eukaryota 329 1.0599999999999998e-85   NTclustered gi|399764216|gb|JQ271727.1| 1215631 g186 i0 88.38 100.557142857143 284 20 100 7 1 280 560 286 Vannella sp. BEN3V 18S ribosomal RNA gene, partial sequence blastn 28156 329 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. BEN3V
26479215 26479215 PRJEB7799c_S_NODE_2208_length_250_cov_4.688372_g2185_i0 PRJEB7799 2208 250 4.688372 11.72093 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 379 9.139999999999998e-101   NTclustered gi|330902855|gb|JF298253.1| 1017091 g2185 i0 97.727 43.128 220 5 88 0 31 250 1738 1519 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 10782 379 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
26480950 26480950 PRJEB7799n_S_NODE_1240_length_368_cov_6.621622_g1203_i0 PRJEB7799 1240 368 6.621622 24.36756896 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 204 9.119999999999999e-48   NTclustered gi|470521486|ref|XM_004353672.1| 1257118 g1203 i0 82.479 63.991847826087 234 39 63 2 66 298 331 99 Acanthamoeba castellanii str. Neff Histone H4, putative (ACA1_376700), partial mRNA blastn 23549 204 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26481726 26481726 PRJEB7799p_S_NODE_2600_length_293_cov_3.217054_g2577_i0 PRJEB7799 2600 293 3.217054 9.42596822 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 492 1.35e-134   NTclustered gi|330902855|gb|JF298253.1| 1017091 g2577 i0 96.939 57.9488054607509 294 7 100 2 1 293 133 425 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 16979 492 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;